RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C SCS22Q6Q595 175 aa7.86□□□□□ -1.15
SPC25YER018C ADH2P00331 348 aaKnown RBP7.85□□□□□ -1.15
SPC25YER018C FUN14P18411 198 aa7.85□□□□□ -1.15
SPC25YER018C APS1P35181 156 aa7.85□□□□□ -1.15
SPC25YER018C AIM29P36154 155 aa7.85□□□□□ -1.15
SPC25YER018C YJR146WP47174 117 aa7.85□□□□□ -1.15
SPC25YER018C ARC15P40518 154 aaRIP-Chip data7.84□□□□□ -1.15not detected
SPC25YER018C YMR103CQ04436 120 aa7.84□□□□□ -1.15
SPC25YER018C HAC1P41546 238 aa7.83□□□□□ -1.16
SPC25YER018C YLR112WQ12130 139 aa7.83□□□□□ -1.16
SPC25YER018C YLR050CQ12155 161 aaKnown RBP7.83□□□□□ -1.16
SPC25YER018C COA3Q3E7B2 85 aa7.83□□□□□ -1.16
SPC25YER018C TRP1P00912 224 aa7.81□□□□□ -1.16
SPC25YER018C MRP49P32388 137 aa7.81□□□□□ -1.16
SPC25YER018C ERI1P62651 68 aaKnown RBP7.81□□□□□ -1.16
SPC25YER018C YMR122W-AQ3E842 84 aa7.81□□□□□ -1.16
SPC25YER018C YGL015CP33199 130 aa7.8□□□□□ -1.16
SPC25YER018C YCL021W-AQ96VH3 125 aa7.8□□□□□ -1.16
SPC25YER018C RPL31AP0C2H8 113 aaKnown RBP7.79□□□□□ -1.16
SPC25YER018C SEC11P15367 167 aa7.79□□□□□ -1.16
SPC25YER018C SPC1P46965 94 aa7.79□□□□□ -1.16
SPC25YER018C YER085CP40058 173 aa7.78□□□□□ -1.16
SPC25YER018C MSL1P40567 111 aaPredicted RBP7.78□□□□□ -1.16
SPC25YER018C RPR2P40571 144 aa7.78□□□□□ -1.16
SPC25YER018C YKL070WP36087 169 aa7.77□□□□□ -1.17
SPC25YER018C YEL008WP40001 126 aa7.77□□□□□ -1.17
SPC25YER018C YGL230CP53074 147 aa7.77□□□□□ -1.17
SPC25YER018C NAT5Q08689 176 aa7.77□□□□□ -1.17
SPC25YER018C ATP15P21306 62 aa7.76□□□□□ -1.17
SPC25YER018C FYV7Q12247 151 aa7.76□□□□□ -1.17
SPC25YER018C BET5Q03630 159 aa7.75□□□□□ -1.17
SPC25YER018C YPL261CQ08976 102 aa7.75□□□□□ -1.17
SPC25YER018C YDL157CQ12082 118 aa7.75□□□□□ -1.17
SPC25YER018C MRPL44P19956 98 aa7.74□□□□□ -1.17
SPC25YER018C SCM4P32564 187 aa7.74□□□□□ -1.17
SPC25YER018C NUP42P49686 430 aaKnown RBP7.74□□□□□ -1.17
SPC25YER018C RPL33AP05744 107 aaKnown RBP7.72□□□□□ -1.17
SPC25YER018C RPL33BP41056 107 aaKnown RBP7.72□□□□□ -1.17
SPC25YER018C AIM11P87275 137 aa7.72□□□□□ -1.17
SPC25YER018C PBA1Q05778 276 aa7.72□□□□□ -1.17
SPC25YER018C ATP5P09457 212 aa7.71□□□□□ -1.18
SPC25YER018C SVP26P38869 228 aa7.71□□□□□ -1.18
SPC25YER018C YMR320WQ04897 101 aa7.71□□□□□ -1.18
SPC25YER018C DFM1Q12743 341 aaKnown RBP7.71□□□□□ -1.18
SPC25YER018C YPR010C-AA5Z2X5 72 aa7.7□□□□□ -1.18
SPC25YER018C YCR007CP25354 239 aa7.7□□□□□ -1.18
SPC25YER018C YKL044WP36092 106 aa7.7□□□□□ -1.18
SPC25YER018C RPL32P38061 130 aaKnown RBP7.7□□□□□ -1.18
SPC25YER018C ERG28P40030 148 aa7.7□□□□□ -1.18
SPC25YER018C DIF1O13577 133 aa7.69□□□□□ -1.18
SPC25YER018C SAE3P89114 91 aa7.69□□□□□ -1.18
SPC25YER018C YLL066W-BQ8TGJ7 56 aa7.69□□□□□ -1.18
SPC25YER018C RTC6O14464 93 aa7.68□□□□□ -1.18
SPC25YER018C YPL073CP40323 161 aa7.68□□□□□ -1.18
SPC25YER018C YDL022C-AP0C5L6 82 aa7.67□□□□□ -1.18
SPC25YER018C YBR219CP38317 127 aa7.67□□□□□ -1.18
SPC25YER018C YAR029WP39549 74 aa7.67□□□□□ -1.18
SPC25YER018C YMR295CQ03559 197 aa7.67□□□□□ -1.18
SPC25YER018C ENV10Q99382 181 aa7.67□□□□□ -1.18
SPC25YER018C YKR041WP36134 250 aa7.66□□□□□ -1.18
SPC25YER018C SHU1P38751 150 aa7.66□□□□□ -1.18
SPC25YER018C YLR194CQ05777 254 aa7.66□□□□□ -1.18
SPC25YER018C YDL085C-AQ3E7B7 68 aaKnown RBP7.66□□□□□ -1.18
SPC25YER018C RRT15Q3E811 62 aa7.66□□□□□ -1.18
SPC25YER018C RPL11AP0C0W9 174 aaKnown RBP7.65□□□□□ -1.18
SPC25YER018C RPL11BQ3E757 174 aaPredicted RBP7.65□□□□□ -1.18
SPC25YER018C RPL18AP0CX49 186 aaKnown RBP7.64□□□□□ -1.19
SPC25YER018C RPL18BP0CX50 186 aaKnown RBP7.64□□□□□ -1.19
SPC25YER018C RPF1P38805 295 aaKnown RBP7.64□□□□□ -1.19
SPC25YER018C PEX17P40155 199 aa7.63□□□□□ -1.19
SPC25YER018C YDR115WQ04598 105 aa7.63□□□□□ -1.19
SPC25YER018C CIN5P40917 295 aa7.62□□□□□ -1.19
SPC25YER018C YEL067CP39978 195 aa7.61□□□□□ -1.19
SPC25YER018C PAU23Q07987 124 aa7.61□□□□□ -1.19
SPC25YER018C PAU17Q12370 124 aa7.61□□□□□ -1.19
SPC25YER018C RPL28P02406 149 aaKnown RBP7.6□□□□□ -1.19
SPC25YER018C YAL064WP39711 94 aa7.6□□□□□ -1.19
SPC25YER018C RPC10P40422 70 aa7.6□□□□□ -1.19
SPC25YER018C IGO2Q9P305 131 aa7.6□□□□□ -1.19
SPC25YER018C YMR175W-AQ3E766 64 aa7.59□□□□□ -1.19
SPC25YER018C YAR023CD6VPM8 179 aa7.58□□□□□ -1.2
SPC25YER018C VTC1P40046 129 aaRIP-Chip data7.58□□□□□ -1.2not detected
SPC25YER018C YNR077CP53758 84 aa7.58□□□□□ -1.2
SPC25YER018C PPT2Q12036 173 aa7.58□□□□□ -1.2
SPC25YER018C GLC8P41818 229 aa7.57□□□□□ -1.2
SPC25YER018C YFR057WP43625 151 aa7.57□□□□□ -1.2
SPC25YER018C MRPS12P53732 153 aa7.57□□□□□ -1.2
SPC25YER018C YPR195CQ06594 109 aa7.57□□□□□ -1.2
SPC25YER018C LSO2Q3E772 92 aaKnown RBP7.57□□□□□ -1.2
SPC25YER018C QCR8P08525 94 aa7.56□□□□□ -1.2
SPC25YER018C YBL081WP38180 368 aaKnown RBP7.56□□□□□ -1.2
SPC25YER018C COX14P39103 70 aa7.56□□□□□ -1.2
SPC25YER018C ADH1P00330 348 aaKnown RBP7.55□□□□□ -1.2
SPC25YER018C OXA1P39952 402 aa7.55□□□□□ -1.2
SPC25YER018C YAL065CO13511 128 aa7.54□□□□□ -1.2
SPC25YER018C CDC43P18898 376 aa7.54□□□□□ -1.2
SPC25YER018C TOA2P32774 122 aa7.54□□□□□ -1.2
SPC25YER018C VTS1Q08831 523 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2 RIP-Chip
SPC25YER018C HAP3P13434 144 aa7.53□□□□□ -1.2
SPC25YER018C UGX2P32772 223 aa7.53□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 272.3 ms