RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C YBR200W-AQ3E755 54 aa1.74□□□□□ -2.13
SSD1YDR293C RPL26AP05743 127 aaKnown RBP1.74□□□□□ -2.13
SSD1YDR293C RPS8AP0CX39 200 aaKnown RBP1.74□□□□□ -2.13
SSD1YDR293C RPS8BP0CX40 200 aaKnown RBP1.74□□□□□ -2.13
SSD1YDR293C PCL1P24867 279 aa1.74□□□□□ -2.13
SSD1YDR293C RPL26BP53221 127 aaKnown RBP1.74□□□□□ -2.13
SSD1YDR293C TOM7P53507 60 aa1.74□□□□□ -2.13
SSD1YDR293C YIL014C-AQ02598 104 aa1.74□□□□□ -2.13
SSD1YDR293C MRPS8Q03799 155 aa1.74□□□□□ -2.13
SSD1YDR293C HPA2Q06592 156 aa1.74□□□□□ -2.13
SSD1YDR293C IRC23Q08416 157 aa1.74□□□□□ -2.13
SSD1YDR293C YOR029WQ12243 111 aa1.74□□□□□ -2.13
SSD1YDR293C COA3Q3E7B2 85 aa1.74□□□□□ -2.13
SSD1YDR293C YIL002W-AQ3E7Z5 69 aa1.74□□□□□ -2.13
SSD1YDR293C AGA1P32323 725 aa1.74□□□□□ -2.13
SSD1YDR293C ATX1P38636 73 aa1.74□□□□□ -2.13
SSD1YDR293C ATP23P53722 227 aa1.74□□□□□ -2.13
SSD1YDR293C ISD11Q6Q560 94 aa1.74□□□□□ -2.13
SSD1YDR293C GLT1Q12680 2145 aaKnown RBP1.73□□□□□ -2.13
SSD1YDR293C CDC43P18898 376 aa1.73□□□□□ -2.13
SSD1YDR293C FZF1P32805 299 aa1.73□□□□□ -2.13
SSD1YDR293C YPT53P36019 220 aa1.73□□□□□ -2.13
SSD1YDR293C YKR045CP36138 183 aa1.73□□□□□ -2.13
SSD1YDR293C SHU1P38751 150 aa1.73□□□□□ -2.13
SSD1YDR293C YJR146WP47174 117 aa1.73□□□□□ -2.13
SSD1YDR293C COX12Q01519 83 aa1.73□□□□□ -2.13
SSD1YDR293C YOL160WQ08321 113 aa1.73□□□□□ -2.13
SSD1YDR293C SLO1Q3E784 85 aa1.73□□□□□ -2.13
SSD1YDR293C YMR122W-AQ3E842 84 aa1.73□□□□□ -2.13
SSD1YDR293C BEM2P39960 2167 aaKnown RBP1.73□□□□□ -2.13
SSD1YDR293C ADH1P00330 348 aaKnown RBP1.73□□□□□ -2.13
SSD1YDR293C RPL29P05747 59 aaPredicted RBP1.73□□□□□ -2.13
SSD1YDR293C PET8P38921 284 aa1.73□□□□□ -2.13
SSD1YDR293C YGL260WP53056 76 aa1.73□□□□□ -2.13
SSD1YDR293C YPL080CQ02826 108 aa1.73□□□□□ -2.13
SSD1YDR293C YMR244WQ04018 355 aa1.73□□□□□ -2.13
SSD1YDR293C SHH4Q06236 168 aa1.73□□□□□ -2.13
SSD1YDR293C YGR035W-AQ45U48 73 aa1.73□□□□□ -2.13
SSD1YDR293C CPR1P14832 162 aaKnown RBP1.72□□□□□ -2.13
SSD1YDR293C TOA2P32774 122 aa1.72□□□□□ -2.13
SSD1YDR293C YNL200CP40165 246 aaKnown RBP1.72□□□□□ -2.13
SSD1YDR293C YMR141CP40211 102 aa1.72□□□□□ -2.13
SSD1YDR293C RPR2P40571 144 aa1.72□□□□□ -2.13
SSD1YDR293C YMR181CQ03231 154 aa1.72□□□□□ -2.13
SSD1YDR293C SEN15Q04675 128 aa1.72□□□□□ -2.13
SSD1YDR293C MSC3Q05812 728 aa1.72□□□□□ -2.13
SSD1YDR293C RDS3Q06835 107 aaPredicted RBP1.72□□□□□ -2.13
SSD1YDR293C VAM10Q08474 114 aa1.72□□□□□ -2.13
SSD1YDR293C SEN1Q00416 2231 aaKnown RBP1.72□□□□□ -2.13
SSD1YDR293C UBC5P15732 148 aa1.72□□□□□ -2.13
SSD1YDR293C VMA11P32842 164 aa1.72□□□□□ -2.13
SSD1YDR293C CTR2P38865 189 aa1.72□□□□□ -2.13
SSD1YDR293C ABF2Q02486 183 aa1.72□□□□□ -2.13
SSD1YDR293C TSC3Q3E790 80 aa1.72□□□□□ -2.13
SSD1YDR293C YCL021W-AQ96VH3 125 aa1.72□□□□□ -2.13
SSD1YDR293C AIM19P40502 157 aa1.72□□□□□ -2.13
SSD1YDR293C DGA1Q08650 418 aa1.72□□□□□ -2.13
SSD1YDR293C CDC39P25655 2108 aaKnown RBP1.71□□□□□ -2.13
SSD1YDR293C POL2P21951 2222 aaKnown RBP1.71□□□□□ -2.14
SSD1YDR293C KRE1P17260 313 aa1.71□□□□□ -2.14
SSD1YDR293C VHS2P40463 436 aa1.71□□□□□ -2.14
SSD1YDR293C YFR035CP43608 114 aa1.71□□□□□ -2.14
SSD1YDR293C AIM11P87275 137 aa1.71□□□□□ -2.14
SSD1YDR293C YDR274CP87283 123 aa1.71□□□□□ -2.14
SSD1YDR293C YER039C-AP0CD97 72 aa1.71□□□□□ -2.14
SSD1YDR293C UGX2P32772 223 aa1.71□□□□□ -2.14
SSD1YDR293C YIA6P40556 373 aa1.71□□□□□ -2.14
SSD1YDR293C YDL186WP48568 277 aa1.71□□□□□ -2.14
SSD1YDR293C KNH1P50112 268 aa1.71□□□□□ -2.14
SSD1YDR293C SGF11Q03067 99 aa1.71□□□□□ -2.14
SSD1YDR293C YGL041C-BQ3E750 60 aa1.71□□□□□ -2.14
SSD1YDR293C FIP1P45976 327 aa1.71□□□□□ -2.14
SSD1YDR293C Q0297Q9ZZV8 51 aa1.71□□□□□ -2.14
SSD1YDR293C RPA12P32529 125 aaKnown RBP1.7□□□□□ -2.14
SSD1YDR293C MRPL24P36525 258 aaPredicted RBP1.7□□□□□ -2.14
SSD1YDR293C RRT13P40042 185 aa1.7□□□□□ -2.14
SSD1YDR293C ARC15P40518 154 aaRIP-Chip data1.7□□□□□ -2.14not detected
SSD1YDR293C CWP2P43497 92 aa1.7□□□□□ -2.14
SSD1YDR293C YFL019CP43576 117 aa1.7□□□□□ -2.14
SSD1YDR293C YPS5P53057 165 aa1.7□□□□□ -2.14
SSD1YDR293C RSM19P53733 91 aaPredicted RBP1.7□□□□□ -2.14
SSD1YDR293C YNL190WP53872 204 aa1.7□□□□□ -2.14
SSD1YDR293C RPL16BP26785 198 aaKnown RBP1.7□□□□□ -2.14
SSD1YDR293C COX14P39103 70 aa1.7□□□□□ -2.14
SSD1YDR293C YER135CP40082 130 aa1.7□□□□□ -2.14
SSD1YDR293C RPC10P40422 70 aa1.7□□□□□ -2.14
SSD1YDR293C YGR039WP53225 103 aa1.7□□□□□ -2.14
SSD1YDR293C YFL041W-AQ3E817 63 aa1.7□□□□□ -2.14
SSD1YDR293C YKR032WP36127 104 aa1.7□□□□□ -2.14
SSD1YDR293C YHL042WP38729 150 aa1.7□□□□□ -2.14
SSD1YDR293C OXA1P39952 402 aa1.7□□□□□ -2.14
SSD1YDR293C YFR057WP43625 151 aa1.7□□□□□ -2.14
SSD1YDR293C RGM1Q00453 211 aa1.7□□□□□ -2.14
SSD1YDR293C YDR114CQ04597 100 aa1.7□□□□□ -2.14
SSD1YDR293C YLR307C-AQ3E825 87 aa1.7□□□□□ -2.14
SSD1YDR293C VTC1P40046 129 aaRIP-Chip data1.69□□□□□ -2.14not detected
SSD1YDR293C HUR1P45820 110 aa1.69□□□□□ -2.14
SSD1YDR293C RUB1Q03919 77 aa1.69□□□□□ -2.14
SSD1YDR293C YKL183C-AQ3E765 70 aa1.69□□□□□ -2.14
SSD1YDR293C YBL039W-BP0C268 59 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 115 ms