RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeast

Gene DPB4, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB4	YDR121W	YBR090C	P38253	122 aa		2.74	□□□□□ -1.97
DPB4	YDR121W	YBR292C	P38357	123 aa		2.74	□□□□□ -1.97
DPB4	YDR121W	YFR045W	P43617	309 aa		2.74	□□□□□ -1.97
DPB4	YDR121W	DAD1	Q12248	94 aa		2.74	□□□□□ -1.97
DPB4	YDR121W	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.74	□□□□□ -1.97
DPB4	YDR121W	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.74	□□□□□ -1.97
DPB4	YDR121W	RPL14A	P36105	138 aa	Known RBP	2.73	□□□□□ -1.97
DPB4	YDR121W	RPL14B	P38754	138 aa	Known RBP	2.73	□□□□□ -1.97
DPB4	YDR121W	GCV3	P39726	170 aa	Predicted RBP	2.73	□□□□□ -1.97
DPB4	YDR121W	PGD1	P40356	397 aa		2.73	□□□□□ -1.97
DPB4	YDR121W	YJL197C-A	P0C5P0	93 aa		2.72	□□□□□ -1.97
DPB4	YDR121W	YLR156W	P0CE96	114 aa		2.72	□□□□□ -1.97
DPB4	YDR121W	YLR159W	P0CE97	114 aa		2.72	□□□□□ -1.97
DPB4	YDR121W	YLR161W	P0CE98	114 aa		2.72	□□□□□ -1.97
DPB4	YDR121W	SEC59	P20048	519 aa		2.72	□□□□□ -1.97
DPB4	YDR121W	CNB1	P25296	175 aa		2.72	□□□□□ -1.97
DPB4	YDR121W	YHR125W	P38831	101 aa		2.72	□□□□□ -1.97
DPB4	YDR121W	SMD3	P43321	101 aa	Known RBP	2.72	□□□□□ -1.97
DPB4	YDR121W	YCL001W-A	P87012	153 aa		2.72	□□□□□ -1.97
DPB4	YDR121W	YMR320W	Q04897	101 aa		2.72	□□□□□ -1.97
DPB4	YDR121W	SHH4	Q06236	168 aa		2.72	□□□□□ -1.97
DPB4	YDR121W	YAR023C	D6VPM8	179 aa		2.71	□□□□□ -1.98
DPB4	YDR121W	ADH3	P07246	375 aa	Known RBP	2.71	□□□□□ -1.98
DPB4	YDR121W	YHR032W-A	P0C5N6	59 aa		2.71	□□□□□ -1.98
DPB4	YDR121W	UBC5	P15732	148 aa		2.71	□□□□□ -1.98
DPB4	YDR121W	ARC15	P40518	154 aa	RIP-Chip data	2.71	□□□□□ -1.98	not detected
DPB4	YDR121W	OST2	P46964	130 aa		2.71	□□□□□ -1.98
DPB4	YDR121W	PAU4	P53427	120 aa		2.71	□□□□□ -1.98
DPB4	YDR121W	ERI1	P62651	68 aa	Known RBP	2.71	□□□□□ -1.98
DPB4	YDR121W	COX19	Q3E731	98 aa		2.71	□□□□□ -1.98
DPB4	YDR121W	YLR307C-A	Q3E825	87 aa		2.71	□□□□□ -1.98
DPB4	YDR121W	YIL059C	P40520	121 aa		2.7	□□□□□ -1.98
DPB4	YDR121W	YGR017W	P53210	297 aa		2.7	□□□□□ -1.98
DPB4	YDR121W	YGR026W	P53217	278 aa		2.7	□□□□□ -1.98
DPB4	YDR121W	YMR122W-A	Q3E842	84 aa		2.7	□□□□□ -1.98
DPB4	YDR121W	YPR010C-A	A5Z2X5	72 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	RPS22A	P0C0W1	130 aa	Known RBP	2.69	□□□□□ -1.98
DPB4	YDR121W	PAU1	P0CE88	120 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	PAU14	P0CE89	120 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	PAU6	P0CE90	120 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	PAU18	P0CE91	120 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	PAU8	P0CE92	120 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	PAU11	P0CE93	120 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	PAU13	P38725	120 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	SPC25	P40014	221 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	ATP19	P81451	68 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	PMP3	P87284	55 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	PAU10	Q03050	120 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	UPS3	Q04006	179 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	PAU20	Q08322	120 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	YOR105W	Q08504	108 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	YOR268C	Q08734	132 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	PAU9	Q3E770	120 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	PCC1	Q3E833	88 aa		2.69	□□□□□ -1.98
DPB4	YDR121W	BET1	P22804	142 aa		2.68	□□□□□ -1.98
DPB4	YDR121W	CYB5	P40312	120 aa		2.68	□□□□□ -1.98
DPB4	YDR121W	TIR1	P10863	254 aa		2.67	□□□□□ -1.98
DPB4	YDR121W	YKR032W	P36127	104 aa		2.67	□□□□□ -1.98
DPB4	YDR121W	YBR013C	P38215	129 aa		2.67	□□□□□ -1.98
DPB4	YDR121W	LCL1	Q02786	101 aa		2.67	□□□□□ -1.98
DPB4	YDR121W	YLR194C	Q05777	254 aa		2.67	□□□□□ -1.98
DPB4	YDR121W	YDR029W	Q12111	104 aa		2.67	□□□□□ -1.98
DPB4	YDR121W	YPR014C	Q6B0W2	109 aa		2.67	□□□□□ -1.98
DPB4	YDR121W	MRPL31	P14063	131 aa	Predicted RBP	2.66	□□□□□ -1.98
DPB4	YDR121W	DDR48	P18899	430 aa	Known RBP	2.66	□□□□□ -1.98
DPB4	YDR121W	SRP21	P32342	167 aa		2.66	□□□□□ -1.98
DPB4	YDR121W	RPB11	P38902	120 aa		2.66	□□□□□ -1.98
DPB4	YDR121W	SKI6	P46948	246 aa	Predicted RBP	2.66	□□□□□ -1.98
DPB4	YDR121W	MOG1	P47123	218 aa		2.66	□□□□□ -1.98
DPB4	YDR121W	PLP1	Q04004	230 aa		2.66	□□□□□ -1.98
DPB4	YDR121W	TSC3	Q3E790	80 aa		2.66	□□□□□ -1.98
DPB4	YDR121W	MRP49	P32388	137 aa		2.65	□□□□□ -1.99
DPB4	YDR121W	YHR140W	P38842	239 aa		2.65	□□□□□ -1.99
DPB4	YDR121W	YAL064W	P39711	94 aa		2.65	□□□□□ -1.99
DPB4	YDR121W	GPI19	Q04082	140 aa		2.65	□□□□□ -1.99
DPB4	YDR121W	YCL001W-B	Q96VH2	84 aa		2.65	□□□□□ -1.99
DPB4	YDR121W	ATP15	P21306	62 aa		2.64	□□□□□ -1.99
DPB4	YDR121W	YGL088W	P53151	121 aa		2.64	□□□□□ -1.99
DPB4	YDR121W	NAT3	Q06504	195 aa		2.64	□□□□□ -1.99
DPB4	YDR121W	YOL014W	Q08110	124 aa		2.64	□□□□□ -1.99
DPB4	YDR121W	DCV1	P43595	202 aa		2.63	□□□□□ -1.99
DPB4	YDR121W	THG1	P53215	237 aa	Known RBP	2.63	□□□□□ -1.99
DPB4	YDR121W	SNA2	P56508	79 aa		2.63	□□□□□ -1.99
DPB4	YDR121W	TVP18	Q04767	167 aa		2.63	□□□□□ -1.99
DPB4	YDR121W	YDR010C	Q12426	110 aa		2.63	□□□□□ -1.99
DPB4	YDR121W	MID2	P36027	376 aa		2.62	□□□□□ -1.99
DPB4	YDR121W	POP7	P38291	140 aa		2.62	□□□□□ -1.99
DPB4	YDR121W	YBR209W	P38311	105 aa		2.62	□□□□□ -1.99
DPB4	YDR121W	CIN5	P40917	295 aa		2.62	□□□□□ -1.99
DPB4	YDR121W	YML100W-A	Q8TGT0	57 aa		2.62	□□□□□ -1.99
DPB4	YDR121W	RPC10	P40422	70 aa		2.61	□□□□□ -1.99
DPB4	YDR121W	DAD3	P69850	94 aa		2.61	□□□□□ -1.99
DPB4	YDR121W	YBR219C	P38317	127 aa		2.6	□□□□□ -1.99
DPB4	YDR121W	PHS1	P40857	217 aa		2.6	□□□□□ -1.99
DPB4	YDR121W	YFL019C	P43576	117 aa		2.6	□□□□□ -1.99
DPB4	YDR121W	SNN1	P48232	102 aa		2.6	□□□□□ -1.99
DPB4	YDR121W	FMP49	A0A023PZB3	126 aa		2.59	□□□□□ -1.99
DPB4	YDR121W	KRE1	P17260	313 aa		2.59	□□□□□ -1.99
DPB4	YDR121W	PAM17	P36147	197 aa		2.59	□□□□□ -1.99
DPB4	YDR121W	PAU7	P39545	55 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms