RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W MSB2P32334 1306 aa4.17□□□□□ -1.74
VMS1YDR049W RPL40AP0CH08 128 aaKnown RBP4.16□□□□□ -1.74
VMS1YDR049W RPL40BP0CH09 128 aaKnown RBP4.16□□□□□ -1.74
VMS1YDR049W HSP26P15992 214 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
VMS1YDR049W KRE1P17260 313 aa4.16□□□□□ -1.74
VMS1YDR049W PAU2P32612 120 aa4.16□□□□□ -1.74
VMS1YDR049W ENV10Q99382 181 aa4.16□□□□□ -1.74
VMS1YDR049W NAT5Q08689 176 aa4.15□□□□□ -1.74
VMS1YDR049W YMR175W-AQ3E766 64 aa4.15□□□□□ -1.74
VMS1YDR049W SNN1P48232 102 aa4.15□□□□□ -1.75
VMS1YDR049W YGL149WP53116 101 aa4.15□□□□□ -1.75
VMS1YDR049W TMC1Q08422 150 aaPredicted RBP4.15□□□□□ -1.75
VMS1YDR049W FIG2P25653 1609 aa4.15□□□□□ -1.75
VMS1YDR049W FKS1P38631 1876 aaKnown RBP4.14□□□□□ -1.75
VMS1YDR049W PMD1P32634 1753 aa4.14□□□□□ -1.75
VMS1YDR049W YLR236CA0A023PZG4 107 aa4.14□□□□□ -1.75
VMS1YDR049W YHR213WP0CI67 198 aa4.14□□□□□ -1.75
VMS1YDR049W RPS23AP0CX29 145 aaKnown RBP4.14□□□□□ -1.75
VMS1YDR049W RPS23BP0CX30 145 aa4.14□□□□□ -1.75
VMS1YDR049W DCV1P43595 202 aa4.14□□□□□ -1.75
VMS1YDR049W BRP1P53194 125 aa4.14□□□□□ -1.75
VMS1YDR049W OST5Q92316 86 aa4.14□□□□□ -1.75
VMS1YDR049W RIF1P29539 1916 aa4.14□□□□□ -1.75
VMS1YDR049W SWM2P40342 146 aa4.13□□□□□ -1.75
VMS1YDR049W RPL33BP41056 107 aaKnown RBP4.13□□□□□ -1.75
VMS1YDR049W MRPS16Q02608 121 aa4.13□□□□□ -1.75
VMS1YDR049W YPR153WQ06537 140 aa4.13□□□□□ -1.75
VMS1YDR049W PAU19P0CE85 124 aa4.12□□□□□ -1.75
VMS1YDR049W PAU3P25610 124 aa4.12□□□□□ -1.75
VMS1YDR049W RPS25AQ3E792 108 aaPredicted RBP4.12□□□□□ -1.75
VMS1YDR049W PAU24P38155 120 aa4.11□□□□□ -1.75
VMS1YDR049W FLO1P32768 1537 aa4.11□□□□□ -1.75
VMS1YDR049W RSM18P40033 138 aa4.11□□□□□ -1.75
VMS1YDR049W YJL027CP47063 138 aaPredicted RBP4.11□□□□□ -1.75
VMS1YDR049W BOL2P53082 120 aa4.11□□□□□ -1.75
VMS1YDR049W PCC1Q3E833 88 aa4.11□□□□□ -1.75
VMS1YDR049W TOM6P33448 61 aa4.1□□□□□ -1.75
VMS1YDR049W ATG8P38182 117 aaRIP-Chip data4.1□□□□□ -1.75not detected
VMS1YDR049W GCV3P39726 170 aaPredicted RBP4.1□□□□□ -1.75
VMS1YDR049W YFL051CP43552 160 aa4.1□□□□□ -1.75
VMS1YDR049W YDL157CQ12082 118 aa4.1□□□□□ -1.75
VMS1YDR049W YLR422WQ06409 1932 aa4.09□□□□□ -1.75
VMS1YDR049W POP3P53833 195 aaPredicted RBP4.09□□□□□ -1.75
VMS1YDR049W CUE4Q04201 117 aaPredicted RBP4.09□□□□□ -1.75
VMS1YDR049W ICY1Q04329 127 aa4.09□□□□□ -1.75
VMS1YDR049W YPR195CQ06594 109 aa4.09□□□□□ -1.75
VMS1YDR049W YOL131WQ08270 108 aa4.09□□□□□ -1.75
VMS1YDR049W SOD1P00445 154 aaKnown RBP4.09□□□□□ -1.76
VMS1YDR049W YHL005CP38752 130 aa4.09□□□□□ -1.76
VMS1YDR049W CIS3P47001 227 aa4.09□□□□□ -1.76
VMS1YDR049W YIL014C-AQ02598 104 aa4.08□□□□□ -1.76
VMS1YDR049W RTC6O14464 93 aa4.07□□□□□ -1.76
VMS1YDR049W PAU16P35994 123 aa4.07□□□□□ -1.76
VMS1YDR049W YBR209WP38311 105 aa4.07□□□□□ -1.76
VMS1YDR049W YIR020CP40575 100 aa4.07□□□□□ -1.76
VMS1YDR049W PAU15P40585 124 aa4.07□□□□□ -1.76
VMS1YDR049W YPI1P43587 155 aa4.07□□□□□ -1.76
VMS1YDR049W YDR119W-AQ2V2P9 66 aa4.07□□□□□ -1.76
VMS1YDR049W UTH1P36135 365 aa4.07□□□□□ -1.76
VMS1YDR049W ATX1P38636 73 aa4.07□□□□□ -1.76
VMS1YDR049W YFL012WP43580 148 aa4.07□□□□□ -1.76
VMS1YDR049W DAD4P69851 72 aa4.07□□□□□ -1.76
VMS1YDR049W RGM1Q00453 211 aa4.07□□□□□ -1.76
VMS1YDR049W HKR1P41809 1802 aa4.06□□□□□ -1.76
VMS1YDR049W KRE9P39005 276 aa4.06□□□□□ -1.76
VMS1YDR049W MET31Q03081 177 aa4.05□□□□□ -1.76
VMS1YDR049W COX8P04039 78 aa4.05□□□□□ -1.76
VMS1YDR049W YJL197C-AP0C5P0 93 aa4.05□□□□□ -1.76
VMS1YDR049W RPB7P34087 171 aa4.05□□□□□ -1.76
VMS1YDR049W ICS3P47034 131 aa4.05□□□□□ -1.76
VMS1YDR049W AVO2Q04749 426 aa4.05□□□□□ -1.76
VMS1YDR049W SEC11P15367 167 aa4.04□□□□□ -1.76
VMS1YDR049W MRPS9P38120 278 aa4.04□□□□□ -1.76
VMS1YDR049W YLR194CQ05777 254 aa4.04□□□□□ -1.76
VMS1YDR049W YNL162W-AQ3E7A8 72 aa4.04□□□□□ -1.76
VMS1YDR049W CMC4Q3E7A9 73 aa4.04□□□□□ -1.76
VMS1YDR049W UBR2Q07963 1872 aa4.04□□□□□ -1.76
VMS1YDR049W RPL36BO14455 100 aaKnown RBP4.03□□□□□ -1.76
VMS1YDR049W RPL36AP05745 100 aaPredicted RBP4.03□□□□□ -1.76
VMS1YDR049W SRX1P36077 127 aa4.03□□□□□ -1.76
VMS1YDR049W COX23P38824 151 aa4.03□□□□□ -1.77
VMS1YDR049W PAU5P43575 122 aa4.03□□□□□ -1.77
VMS1YDR049W IMP2P46972 177 aa4.03□□□□□ -1.77
VMS1YDR049W YMR030W-AQ3E760 96 aa4.03□□□□□ -1.77
VMS1YDR049W MOT1P32333 1867 aa4.02□□□□□ -1.77
VMS1YDR049W YEL014CP39999 101 aa4.02□□□□□ -1.77
VMS1YDR049W PAU23Q07987 124 aa4.02□□□□□ -1.77
VMS1YDR049W VPS68Q12016 184 aa4.02□□□□□ -1.77
VMS1YDR049W PAU17Q12370 124 aa4.02□□□□□ -1.77
VMS1YDR049W UTR5P32630 166 aa4.01□□□□□ -1.77
VMS1YDR049W YBR292CP38357 123 aa4.01□□□□□ -1.77
VMS1YDR049W FIT2Q08906 153 aa4.01□□□□□ -1.77
VMS1YDR049W YIL134C-AQ45U18 67 aa4.01□□□□□ -1.77
VMS1YDR049W GSC2P40989 1895 aa4□□□□□ -1.77
VMS1YDR049W HSP150P32478 413 aa4□□□□□ -1.77
VMS1YDR049W MIC27P50945 234 aa4□□□□□ -1.77
VMS1YDR049W HPA2Q06592 156 aa4□□□□□ -1.77
VMS1YDR049W YDR381C-AQ3E6R5 114 aa3.99□□□□□ -1.77
VMS1YDR049W MHF2Q3E829 80 aa3.99□□□□□ -1.77
VMS1YDR049W RPL26AP05743 127 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms