RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	SEC72	P39742	193 aa	Known RBP	4	□□□□□ -1.77
ATG12	YBR217W	YER085C	P40058	173 aa		4	□□□□□ -1.77
ATG12	YBR217W	PCL2	P25693	308 aa		3.99	□□□□□ -1.77
ATG12	YBR217W	ERG28	P40030	148 aa		3.99	□□□□□ -1.77
ATG12	YBR217W	ARL3	Q02804	198 aa		3.99	□□□□□ -1.77
ATG12	YBR217W	YOR008C-A	Q3E7B9	74 aa		3.99	□□□□□ -1.77
ATG12	YBR217W	YAR023C	D6VPM8	179 aa		3.98	□□□□□ -1.77
ATG12	YBR217W	TRP1	P00912	224 aa		3.98	□□□□□ -1.77
ATG12	YBR217W	GSP1	P32835	219 aa	Known RBP	3.98	□□□□□ -1.77
ATG12	YBR217W	GSP2	P32836	220 aa	Known RBP	3.98	□□□□□ -1.77
ATG12	YBR217W	YEL008W	P40001	126 aa		3.98	□□□□□ -1.77
ATG12	YBR217W	PKR1	Q03880	122 aa	Known RBP	3.98	□□□□□ -1.77
ATG12	YBR217W	ERG27	Q12452	347 aa	Known RBP	3.98	□□□□□ -1.77
ATG12	YBR217W	YCL021W-A	Q96VH3	125 aa		3.98	□□□□□ -1.77
ATG12	YBR217W	YBR219C	P38317	127 aa		3.97	□□□□□ -1.77
ATG12	YBR217W	YER134C	P40081	178 aa		3.97	□□□□□ -1.77
ATG12	YBR217W	TOS6	P48560	102 aa		3.97	□□□□□ -1.77
ATG12	YBR217W	YGL118C	P53132	145 aa		3.97	□□□□□ -1.77
ATG12	YBR217W	TIM11	P81449	96 aa	Predicted RBP	3.97	□□□□□ -1.77
ATG12	YBR217W	BET5	Q03630	159 aa		3.97	□□□□□ -1.77
ATG12	YBR217W	MED7	Q08278	222 aa		3.97	□□□□□ -1.77
ATG12	YBR217W	YDR034C-A	P0C289	58 aa		3.96	□□□□□ -1.78
ATG12	YBR217W	HMRA2	P0CY13	119 aa		3.96	□□□□□ -1.78
ATG12	YBR217W	YBL081W	P38180	368 aa	Known RBP	3.96	□□□□□ -1.78
ATG12	YBR217W	YAL064W	P39711	94 aa		3.96	□□□□□ -1.78
ATG12	YBR217W	URM1	P40554	99 aa	Predicted RBP	3.96	□□□□□ -1.78
ATG12	YBR217W	TPT1	Q12272	230 aa	Known RBP	3.96	□□□□□ -1.78
ATG12	YBR217W	RPC10	P40422	70 aa		3.95	□□□□□ -1.78
ATG12	YBR217W	OST3	P48439	350 aa		3.95	□□□□□ -1.78
ATG12	YBR217W	ERV14	P53173	138 aa		3.95	□□□□□ -1.78
ATG12	YBR217W	YPL229W	Q99395	206 aa		3.95	□□□□□ -1.78
ATG12	YBR217W	YDR042C	Q03205	200 aa		3.94	□□□□□ -1.78
ATG12	YBR217W	YMR295C	Q03559	197 aa		3.94	□□□□□ -1.78
ATG12	YBR217W	YML108W	Q03759	105 aa		3.94	□□□□□ -1.78
ATG12	YBR217W	COA3	Q3E7B2	85 aa		3.94	□□□□□ -1.78
ATG12	YBR217W	ENV10	Q99382	181 aa		3.94	□□□□□ -1.78
ATG12	YBR217W	RPL31A	P0C2H8	113 aa	Known RBP	3.93	□□□□□ -1.78
ATG12	YBR217W	DUT1	P33317	147 aa		3.93	□□□□□ -1.78
ATG12	YBR217W	POP3	P53833	195 aa	Predicted RBP	3.93	□□□□□ -1.78
ATG12	YBR217W	YLR112W	Q12130	139 aa		3.93	□□□□□ -1.78
ATG12	YBR217W	HTL1	Q9URQ5	78 aa		3.93	□□□□□ -1.78
ATG12	YBR217W	ATP15	P21306	62 aa		3.92	□□□□□ -1.78
ATG12	YBR217W	CIN5	P40917	295 aa		3.92	□□□□□ -1.78
ATG12	YBR217W	RPL27B	P0C2H7	136 aa	Known RBP	3.91	□□□□□ -1.78
ATG12	YBR217W	APS1	P35181	156 aa		3.91	□□□□□ -1.78
ATG12	YBR217W	SNA2	P56508	79 aa		3.91	□□□□□ -1.78
ATG12	YBR217W	YMR103C	Q04436	120 aa		3.91	□□□□□ -1.78
ATG12	YBR217W	YLR194C	Q05777	254 aa		3.91	□□□□□ -1.78
ATG12	YBR217W	YDR029W	Q12111	104 aa		3.91	□□□□□ -1.78
ATG12	YBR217W	SMP1	P38128	452 aa		3.9	□□□□□ -1.79
ATG12	YBR217W	FYV4	P38783	130 aa	Predicted RBP	3.9	□□□□□ -1.79
ATG12	YBR217W	CMC2	Q3E7A4	109 aa		3.9	□□□□□ -1.79
ATG12	YBR217W	YAR029W	P39549	74 aa		3.89	□□□□□ -1.79
ATG12	YBR217W	YMR175W-A	Q3E766	64 aa		3.89	□□□□□ -1.79
ATG12	YBR217W	YAL065C	O13511	128 aa		3.88	□□□□□ -1.79
ATG12	YBR217W	SSS1	P35179	80 aa		3.88	□□□□□ -1.79
ATG12	YBR217W	YKL070W	P36087	169 aa		3.88	□□□□□ -1.79
ATG12	YBR217W	VTC1	P40046	129 aa	RIP-Chip data	3.88	□□□□□ -1.79	not detected
ATG12	YBR217W	CUE4	Q04201	117 aa	Predicted RBP	3.88	□□□□□ -1.79
ATG12	YBR217W	SEN15	Q04675	128 aa		3.88	□□□□□ -1.79
ATG12	YBR217W	SCS22	Q6Q595	175 aa		3.88	□□□□□ -1.79
ATG12	YBR217W	YDL022C-A	P0C5L6	82 aa		3.87	□□□□□ -1.79
ATG12	YBR217W	SHU1	P38751	150 aa		3.87	□□□□□ -1.79
ATG12	YBR217W	AIM11	P87275	137 aa		3.87	□□□□□ -1.79
ATG12	YBR217W	DFM1	Q12743	341 aa	Known RBP	3.87	□□□□□ -1.79
ATG12	YBR217W	COX14	P39103	70 aa		3.86	□□□□□ -1.79
ATG12	YBR217W	PEX22	P39718	180 aa		3.86	□□□□□ -1.79
ATG12	YBR217W	YPL261C	Q08976	102 aa		3.86	□□□□□ -1.79
ATG12	YBR217W	YLR307C-A	Q3E825	87 aa		3.86	□□□□□ -1.79
ATG12	YBR217W	YIL134C-A	Q45U18	67 aa		3.86	□□□□□ -1.79
ATG12	YBR217W	YKL069W	P36088	180 aa		3.85	□□□□□ -1.79
ATG12	YBR217W	TOA2	P32774	122 aa		3.84	□□□□□ -1.79
ATG12	YBR217W	PAU16	P35994	123 aa		3.84	□□□□□ -1.79
ATG12	YBR217W	MRPL11	P36521	249 aa	Predicted RBP	3.84	□□□□□ -1.79
ATG12	YBR217W	YDL241W	Q07738	123 aa		3.84	□□□□□ -1.79
ATG12	YBR217W	RPL18A	P0CX49	186 aa	Known RBP	3.83	□□□□□ -1.8
ATG12	YBR217W	RPL18B	P0CX50	186 aa	Known RBP	3.83	□□□□□ -1.8
ATG12	YBR217W	SMD1	Q02260	146 aa	Predicted RBP	3.83	□□□□□ -1.8
ATG12	YBR217W	LCL1	Q02786	101 aa		3.83	□□□□□ -1.8
ATG12	YBR217W	YLR050C	Q12155	161 aa	Known RBP	3.83	□□□□□ -1.8
ATG12	YBR217W	AQY2	P0CD90	149 aa		3.82	□□□□□ -1.8
ATG12	YBR217W	YKR041W	P36134	250 aa		3.82	□□□□□ -1.8
ATG12	YBR217W	RPL32	P38061	130 aa	Known RBP	3.82	□□□□□ -1.8
ATG12	YBR217W	PEX17	P40155	199 aa		3.82	□□□□□ -1.8
ATG12	YBR217W	HAC1	P41546	238 aa		3.82	□□□□□ -1.8
ATG12	YBR217W	CWP2	P43497	92 aa		3.82	□□□□□ -1.8
ATG12	YBR217W	MRPS12	P53732	153 aa		3.82	□□□□□ -1.8
ATG12	YBR217W	ATP16	Q12165	160 aa		3.82	□□□□□ -1.8
ATG12	YBR217W	ADH1	P00330	348 aa	Known RBP	3.81	□□□□□ -1.8
ATG12	YBR217W	SEC11	P15367	167 aa		3.81	□□□□□ -1.8
ATG12	YBR217W	CDC43	P18898	376 aa		3.81	□□□□□ -1.8
ATG12	YBR217W	OXA1	P39952	402 aa		3.81	□□□□□ -1.8
ATG12	YBR217W	YFL067W	P43537	175 aa		3.81	□□□□□ -1.8
ATG12	YBR217W	CNL1	Q06333	122 aa		3.81	□□□□□ -1.8
ATG12	YBR217W	PPT2	Q12036	173 aa		3.81	□□□□□ -1.8
ATG12	YBR217W	ECM12	O13529	151 aa		3.8	□□□□□ -1.8
ATG12	YBR217W	RPL28	P02406	149 aa	Known RBP	3.8	□□□□□ -1.8
ATG12	YBR217W	YEL067C	P39978	195 aa		3.8	□□□□□ -1.8
ATG12	YBR217W	MMS2	P53152	137 aa		3.8	□□□□□ -1.8
ATG12	YBR217W	ABF2	Q02486	183 aa		3.8	□□□□□ -1.8

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