RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 DDHD2O94830 711 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 ZRANB2O95218 330 aaKnown RBP eCLIP6.9□□□□□ -1.31
RTTN-215ENST00000639487 RAG1P15918 1043 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 CD44P16070 742 aaKnown RBP6.9□□□□□ -1.31
RTTN-215ENST00000639487 TSHRP16473 764 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 PCDH1Q08174 1060 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 KCNMA1Q12791 1236 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 CUL2Q13617 745 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 CTTNQ14247 550 aaKnown RBP6.9□□□□□ -1.31
RTTN-215ENST00000639487 RELL1Q8IUW5 271 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 TMEM139Q8IV31 216 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 CARFQ8N187 725 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 MNS1Q8NEH6 495 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 CPVLQ9H3G5 476 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 BCAS3Q9H6U6 928 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 MRM3Q9HC36 420 aaKnown RBP6.9□□□□□ -1.31
RTTN-215ENST00000639487 TRPC7Q9HCX4 862 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 PRDM5Q9NQX1 630 aaPredicted RBP6.9□□□□□ -1.31
RTTN-215ENST00000639487 UVRAGQ9P2Y5 699 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 PRKAG2Q9UGJ0 569 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 NME7Q9Y5B8 376 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 KLK4Q9Y5K2 254 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 DYNC1I1O14576 645 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 TADA3O75528 432 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 FGF18O76093 207 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 ASLP04424 464 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 CYC1P08574 325 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 THPOP40225 353 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 MLLT3P42568 568 aaPredicted RBP6.9□□□□□ -1.31
RTTN-215ENST00000639487 SLC1A1P43005 524 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 NOP2P46087 812 aaKnown RBP6.9□□□□□ -1.31
RTTN-215ENST00000639487 BCAT1P54687 386 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 RAD23BP54727 409 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 NLRP11P59045 1033 aaKnown RBP6.9□□□□□ -1.31
RTTN-215ENST00000639487 RPL26P61254 145 aaKnown RBP6.9□□□□□ -1.31
RTTN-215ENST00000639487 ZP2Q05996 745 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 STK4Q13043 487 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 HGSNATQ68CP4 663 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 RNF165Q6ZSG1 346 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 CYS1Q717R9 158 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 HOMER1Q86YM7 354 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 VSTM4Q8IW00 320 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 FSIP1Q8NA03 581 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 NUP62CLQ9H1M0 184 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 RMI1Q9H9A7 625 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 KLHL42Q9P2K6 505 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 BAZ2BQ9UIF8 2168 aaKnown RBP6.9□□□□□ -1.31
RTTN-215ENST00000639487 RPL26L1Q9UNX3 145 aaKnown RBP6.9□□□□□ -1.31
RTTN-215ENST00000639487 ZNF232Q9UNY5 417 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 TRPC6Q9Y210 931 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 PRR33A8MZF0 331 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 NAT2P11245 290 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 CD52P31358 61 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 HSPA9P38646 679 aaKnown RBP6.89□□□□□ -1.31
RTTN-215ENST00000639487 CD151P48509 253 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 MAPKAPK2P49137 400 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 CASP5P51878 434 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 GRM3Q14832 879 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 KARSQ15046 597 aaKnown RBP6.89□□□□□ -1.31
RTTN-215ENST00000639487 SOWAHAQ2M3V2 549 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 FBXO43Q4G163 708 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 ICE2Q659A1 982 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 ISM2Q6H9L7 571 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 NEK5Q6P3R8 708 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 ZNF765Q7L2R6 523 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 IRF2BP2Q7Z5L9 587 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 PDCL2Q8N4E4 241 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 SLC4A11Q8NBS3 891 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 DBF4BQ8NFT6 615 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.89□□□□□ -1.31
RTTN-215ENST00000639487 STAMQ92783 540 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 LYSMD1Q96S90 227 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 UCK1Q9HA47 277 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.89□□□□□ -1.31
RTTN-215ENST00000639487 DKK3Q9UBP4 350 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 CD207Q9UJ71 328 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 TLR6Q9Y2C9 796 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.89□□□□□ -1.31
RTTN-215ENST00000639487 WDR27A2RRH5 827 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 MTMR11A4FU01 709 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 KPNA7A9QM74 516 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 POLR2DO15514 142 aaKnown RBP6.89□□□□□ -1.31
RTTN-215ENST00000639487 ERLIN2O94905 339 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 TNNC2P02585 160 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 MYL7Q01449 175 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 KRT17Q04695 432 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 IKQ13123 557 aaPredicted RBP6.89□□□□□ -1.31
RTTN-215ENST00000639487 XRCC4Q13426 336 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 HNRNPDQ14103 355 aaKnown RBP6.89□□□□□ -1.31
RTTN-215ENST00000639487 ZYXQ15942 572 aaKnown RBP6.89□□□□□ -1.31
RTTN-215ENST00000639487 ANKRD40Q6AI12 368 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 RNF149Q8NC42 400 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 MAML1Q92585 1016 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 ADAM2Q99965 735 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 RAB20Q9NX57 234 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 TBC1D30Q9Y2I9 924 aa6.89□□□□□ -1.31
RTTN-215ENST00000639487 H0YHG0 523 aa6.88□□□□□ -1.31
RTTN-215ENST00000639487 K7ENM7 598 aa6.88□□□□□ -1.31
RTTN-215ENST00000639487 MAN2B1O00754 1011 aa6.88□□□□□ -1.31
RTTN-215ENST00000639487 SLC9A3R1O14745 358 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms