RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 SNX13Q9Y5W8 968 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 EIF3DO15371 548 aaKnown RBP eCLIP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 TRIM13O60858 407 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 FAM200BP0CF97 657 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 GTF2H1P32780 548 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 RPS7P62081 194 aaKnown RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 MMRN1Q13201 1228 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 KRR1Q13601 381 aaKnown RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 BNIPLQ7Z465 357 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 VMP1Q96GC9 406 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 NIF3L1Q9GZT8 377 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 MZF1P28698 734 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 NEDD1Q8NHV4 660 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 SERPINB12Q96P63 405 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 RNPEPQ9H4A4 650 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 HAO1Q9UJM8 370 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 KCNH4Q9UQ05 1017 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 CD4P01730 458 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 DDX39BQ13838 428 aaKnown RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 MFSD4BQ5TF39 518 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 DMAP1Q9NPF5 467 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 MTSS1O43312 755 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 RHOBTB3O94955 611 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 EPHA7Q15375 998 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 PGS1Q32NB8 556 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 ARMCX4Q5H9R4 360 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 BNC2Q6ZN30 1099 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 ADGRA3Q8IWK6 1321 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 SOAT2O75908 522 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 FNTAP49354 379 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 MTFR1Q15390 333 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 SV2CQ496J9 727 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 CYB5D1Q6P9G0 228 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 MTMR4Q9NYA4 1195 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 HEY2Q9UBP5 337 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 PLA2R1Q13018 1463 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 RRM2P31350 389 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 FAM136AQ96C01 138 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 ABI2Q9NYB9 513 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 WHRNQ9P202 907 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 CCDC88AQ3V6T2 1871 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 SCARF1Q14162 830 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 FAXCQ5TGI0 409 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 AGAP9Q5VTM2 703 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 ARMC6Q6NXE6 501 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 CCDC33Q8N5R6 958 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 FEZF2Q8TBJ5 459 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 TEX13BQ9BXU2 312 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 ROGDIQ9GZN7 287 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 KCTD10Q9H3F6 313 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 NUP214P35658 2090 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 HOXD10P28358 340 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 HARS2P49590 506 aaKnown RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 DNAJC7Q99615 494 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 SPRTNQ9H040 489 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 SLC25A13Q9UJS0 675 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 ALG6Q9Y672 507 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 C4BPBP20851 252 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 ATP6V1B2P21281 511 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 NUP107P57740 925 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 AMHR2Q16671 573 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 PLEKHA7Q6IQ23 1121 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 LRRC6Q86X45 466 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 LRRC34Q8IZ02 419 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 UBA3Q8TBC4 463 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 COQ7Q99807 217 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 PAPOLBQ9NRJ5 636 aaKnown RBP9.43□□□□□ -0.9
CSMD1-218ENST00000635120 A0A1W2PQJ5 194 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 GLRBP48167 497 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 PEX5P50542 639 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 RBP3P10745 1247 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 MAPK7Q13164 816 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 SDR42E2A6NKP2 422 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 DMPKQ09013 629 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 OASLQ15646 514 aaKnown RBP9.43□□□□□ -0.9
CSMD1-218ENST00000635120 CLEC17AQ6ZS10 378 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 SLC44A2Q8IWA5 706 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-218ENST00000635120 DDI1Q8WTU0 396 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 FAR2Q96K12 515 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 KNTC1P50748 2209 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 SMAPO00193 183 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 CNTN1Q12860 1018 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 CDC16Q13042 620 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 DPP10Q8N608 796 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 RAET1EQ8TD07 263 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 SIKE1Q9BRV8 207 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 TSEN34Q9BSV6 310 aaKnown RBP9.43□□□□□ -0.9
CSMD1-218ENST00000635120 NMRK1Q9NWW6 199 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 SNTNA6NMZ2 147 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 NPTXRO95502 500 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 CHRNB3Q05901 458 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 KLHDC7AQ5VTJ3 777 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 CCDC149Q6ZUS6 474 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 VN1R5Q7Z5H4 357 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 TRIM48Q8IWZ4 208 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 MMGT1Q8N4V1 131 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 CARD9Q9H257 536 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 NMRK2Q9NPI5 230 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 IL1RAPL1Q9NZN1 696 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 EIF3LQ9Y262 564 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms