RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 AARSP49588 968 aaKnown RBP eCLIP5.85□□□□□ -1.47
LINC00397-202ENST00000606785 TUBP50607 506 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 AFF3P51826 1226 aaKnown RBP5.85□□□□□ -1.47
LINC00397-202ENST00000606785 DGKEP52429 567 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 ZNF134P52741 427 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 ACTR2P61160 394 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 TRPC3Q13507 836 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 ATP1A4Q13733 1029 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 TAF2Q6P1X5 1199 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 SLC30A10Q6XR72 485 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 POC1BQ8TC44 478 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 GRAMD1AQ96CP6 724 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 MARS2Q96GW9 593 aaKnown RBP5.85□□□□□ -1.47
LINC00397-202ENST00000606785 PHACTR3Q96KR7 559 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 KCNC2Q96PR1 638 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 MED15Q96RN5 788 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 PNKPQ96T60 521 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 REXO4Q9GZR2 422 aaKnown RBP5.85□□□□□ -1.47
LINC00397-202ENST00000606785 TWSG1Q9GZX9 223 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 EPS8L2Q9H6S3 715 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 SEC61A2Q9H9S3 476 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 RPS6KL1Q9Y6S9 549 aa5.85□□□□□ -1.47
LINC00397-202ENST00000606785 PRSS47A8MTI9 375 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 B4E171 279 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 H0Y3Z8 333 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 hCG_1984214I3L0E3 225 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 RGS10O43665 173 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 MFAP3LO75121 409 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 BAIAP3O94812 1187 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 TK1P04183 234 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 PRKCBP05771 671 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 IFIT1P09914 478 aaKnown RBP5.84□□□□□ -1.47
LINC00397-202ENST00000606785 JUPP14923 745 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 KCNA3P22001 575 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 TSPAN7P41732 249 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 SEC24CP53992 1094 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 VAMP2P63027 116 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 UBE3AQ05086 875 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 MYO1EQ12965 1108 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 GPS1Q13098 491 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 GRM7Q14831 915 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 ABLIM2Q6H8Q1 611 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 MZT2BQ6NZ67 158 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 RAB11FIP2Q7L804 512 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 PLEKHH3Q7Z736 793 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 TBC1D1Q86TI0 1168 aaPredicted RBP5.84□□□□□ -1.47
LINC00397-202ENST00000606785 ELOA2Q8IYF1 753 aaPredicted RBP5.84□□□□□ -1.47
LINC00397-202ENST00000606785 TP53I13Q8NBR0 393 aaPredicted RBP5.84□□□□□ -1.47
LINC00397-202ENST00000606785 NSUN7Q8NE18 718 aaKnown RBP5.84□□□□□ -1.47
LINC00397-202ENST00000606785 MDGA1Q8NFP4 955 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 CPT1CQ8TCG5 803 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 HTRA1Q92743 480 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 PPP2R3CQ969Q6 453 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 TMEM176AQ96HP8 235 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 LRIG1Q96JA1 1093 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 ZNF668Q96K58 619 aaPredicted RBP5.84□□□□□ -1.47
LINC00397-202ENST00000606785 TRAPPC9Q96Q05 1148 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 LMF1Q96S06 567 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 PLA2G12BQ9BX93 195 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 OSBPL5Q9H0X9 879 aaPredicted RBP5.84□□□□□ -1.47
LINC00397-202ENST00000606785 DAPP1Q9UN19 280 aa5.84□□□□□ -1.47
LINC00397-202ENST00000606785 SMG5Q9UPR3 1016 aaKnown RBP5.84□□□□□ -1.47
LINC00397-202ENST00000606785 LAS1LQ9Y4W2 734 aaKnown RBP5.84□□□□□ -1.47
LINC00397-202ENST00000606785 SRGAP2O75044 1071 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 KRT1P04264 644 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 SPATA31D3P0C874 917 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 KLRK1P26718 216 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 IRX6P78412 446 aaPredicted RBP5.83□□□□□ -1.48
LINC00397-202ENST00000606785 MAPK7Q13164 816 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 ELAVL1Q15717 326 aaKnown RBP5.83□□□□□ -1.48
LINC00397-202ENST00000606785 TRIM60Q495X7 471 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 NFRKBQ6P4R8 1299 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 ARHGEF18Q6ZSZ5 1173 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 SPATA31D4Q6ZUB0 917 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 RHOT2Q8IXI1 618 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 SPARTQ8N0X7 666 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 ZDHHC12Q96GR4 267 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 COG8Q96MW5 612 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 LRRC37BQ96QE4 947 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 MPHOSPH9Q99550 1183 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 TRIM5Q9C035 493 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 JMJD4Q9H9V9 463 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 ALG13Q9NP73 1137 aaKnown RBP5.83□□□□□ -1.48
LINC00397-202ENST00000606785 TMEM160Q9NX00 188 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 VSX1Q9NZR4 365 aaPredicted RBP5.83□□□□□ -1.48
LINC00397-202ENST00000606785 DNAJB11Q9UBS4 358 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 JAG2Q9Y219 1238 aa5.83□□□□□ -1.48
LINC00397-202ENST00000606785 CCDC196A0A1B0GTZ2 297 aa5.82□□□□□ -1.48
LINC00397-202ENST00000606785 E7ENX8 843 aa5.82□□□□□ -1.48
LINC00397-202ENST00000606785 J3KTA2 159 aa5.82□□□□□ -1.48
LINC00397-202ENST00000606785 CD3EAPO15446 510 aaKnown RBP5.82□□□□□ -1.48
LINC00397-202ENST00000606785 DHHO43323 396 aa5.82□□□□□ -1.48
LINC00397-202ENST00000606785 ATP1A3P13637 1013 aa5.82□□□□□ -1.48
LINC00397-202ENST00000606785 AKT1P31749 480 aa5.82□□□□□ -1.48
LINC00397-202ENST00000606785 CCR5P51681 352 aa5.82□□□□□ -1.48
LINC00397-202ENST00000606785 PRKAG1P54619 331 aa5.82□□□□□ -1.48
LINC00397-202ENST00000606785 SLURP1P55000 103 aa5.82□□□□□ -1.48
LINC00397-202ENST00000606785 PPP2CBP62714 309 aa5.82□□□□□ -1.48
LINC00397-202ENST00000606785 PPP2CAP67775 309 aa5.82□□□□□ -1.48
LINC00397-202ENST00000606785 TAP2Q03519 686 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms