RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 LRRC4Q9HBW1 653 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 CSNK1G1Q9HCP0 422 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 CTTNBP2NLQ9P2B4 639 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 CYTH4Q9UIA0 394 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 TFR2Q9UP52 801 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 MACROD2A1Z1Q3 448 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 RRM1P23921 792 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 DNAJB2P25686 324 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 CA8P35219 290 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 GRIK1P39086 918 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 RPL34P49207 117 aaKnown RBP19.59■□□□□ 0.73
SSBP4-212ENST00000601919 NDUFV1P49821 464 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 ROR1Q01973 937 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 PTP4A2Q12974 167 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 PTPN14Q15678 1187 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 PDE12Q6L8Q7 609 aaKnown RBP19.59■□□□□ 0.73
SSBP4-212ENST00000601919 DNAJC24Q6P3W2 148 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 PIGZQ86VD9 579 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 SLC35G2Q8TBE7 412 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 ALS2CR12Q96Q35 445 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 SMOQ99835 787 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 CLSTN3Q9BQT9 956 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 RXFP1Q9HBX9 757 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 NGRNQ9NPE2 291 aaKnown RBP19.59■□□□□ 0.73
SSBP4-212ENST00000601919 ENTPD7Q9NQZ7 604 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 HSFX1Q9UBD0 423 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 LCMT1Q9UIC8 334 aa19.59■□□□□ 0.73
SSBP4-212ENST00000601919 A0A0U1RQJ8 604 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 FAM170AA1A519 330 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 MTMR11A4FU01 709 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 CXCL14O95715 111 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 ERBB2P04626 1255 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 CYP2F1P24903 491 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 RGS7P49802 495 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 RAB33AQ14088 237 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 SMC1AQ14683 1233 aaKnown RBP19.58■□□□□ 0.72
SSBP4-212ENST00000601919 CYP4A22Q5TCH4 519 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 PLEKHA7Q6IQ23 1121 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 RSPO2Q6UXX9 243 aaPredicted RBP19.58■□□□□ 0.72
SSBP4-212ENST00000601919 SIX6OS1Q8N1H7 587 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 C3orf20Q8ND61 904 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 ZNF461Q8TAF7 563 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 SPPL3Q8TCT6 385 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 ATRIPQ8WXE1 791 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 ARHGEF26Q96DR7 871 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 PGLYRP2Q96PD5 576 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 TCF25Q9BQ70 676 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 NUP85Q9BW27 656 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 EMILIN2Q9BXX0 1053 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 PBX4Q9BYU1 374 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 ALG13Q9NP73 1137 aaKnown RBP19.58■□□□□ 0.72
SSBP4-212ENST00000601919 TLR9Q9NR96 1032 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 TRIM10Q9UDY6 481 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 AFF4Q9UHB7 1163 aaKnown RBP19.58■□□□□ 0.72
SSBP4-212ENST00000601919 YBX2Q9Y2T7 364 aaKnown RBP19.58■□□□□ 0.72
SSBP4-212ENST00000601919 IRAK3Q9Y616 596 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 DUSP10Q9Y6W6 482 aa19.58■□□□□ 0.72
SSBP4-212ENST00000601919 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.57■□□□□ 0.72
SSBP4-212ENST00000601919 WDR27A2RRH5 827 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 E5RJQ4 531 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 TULP2O00295 520 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 SART1O43290 800 aaKnown RBP19.57■□□□□ 0.72
SSBP4-212ENST00000601919 LILRB3O75022 631 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 MTA2O94776 668 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 FBXO21O94952 628 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 RPL17P18621 184 aaKnown RBP19.57■□□□□ 0.72
SSBP4-212ENST00000601919 TUFMP49411 452 aaKnown RBP19.57■□□□□ 0.72
SSBP4-212ENST00000601919 HADHBP55084 474 aaKnown RBP19.57■□□□□ 0.72
SSBP4-212ENST00000601919 RPL10AP62906 217 aaKnown RBP19.57■□□□□ 0.72
SSBP4-212ENST00000601919 PPP2R2DQ66LE6 453 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 OR6B2Q6IFH4 312 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 RNF19BQ6ZMZ0 732 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 XYLT1Q86Y38 959 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 SCN4BQ8IWT1 228 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 ATAD1Q8NBU5 361 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 TRIM58Q8NG06 486 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 ZNF564Q8TBZ8 553 aaPredicted RBP19.57■□□□□ 0.72
SSBP4-212ENST00000601919 POF1BQ8WVV4 589 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 C8orf48Q96LL4 319 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 CEP295NLQ96MC4 621 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 SELENOOQ9BVL4 669 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 MTUS1Q9ULD2 1270 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 PATJQ8NI35 1801 aa19.57■□□□□ 0.72
SSBP4-212ENST00000601919 F8VP50 259 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 ATMINO43313 823 aaPredicted RBP19.56■□□□□ 0.72
SSBP4-212ENST00000601919 BEST1O76090 585 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 ABLIM3O94929 683 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 ADH1AP07327 375 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 LCP1P13796 627 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 ELF1P32519 619 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 SCNN1AP37088 669 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 ADCY1Q08828 1119 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 MAMLD1Q13495 774 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 MGAT5BQ3V5L5 792 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 C2CD6Q53TS8 623 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 DCUN1D2Q6PH85 259 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 SYCE1Q8N0S2 351 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 ZMIZ2Q8NF64 920 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 MCRS1Q96EZ8 462 aa19.56■□□□□ 0.72
SSBP4-212ENST00000601919 KCNK16Q96T55 309 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms