RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 TIGD5Q53EQ6 642 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 SGO2Q562F6 1265 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 SEL1L2Q5TEA6 688 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 DNAJC24Q6P3W2 148 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 LCLAT1Q6UWP7 414 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 CCNI2Q6ZMN8 369 aaPredicted RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 RBM23Q86U06 439 aaKnown RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 UNC93AQ86WB7 457 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 ECHDC2Q86YB7 292 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 ABI1Q8IZP0 508 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 EIF1ADQ8N9N8 165 aaKnown RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 C12orf50Q8NA57 414 aaPredicted RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 SPPL3Q8TCT6 385 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 POF1BQ8WVV4 589 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 SEC14L1Q92503 715 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 MRPL45Q9BRJ2 306 aaKnown RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 TRAIPQ9BWF2 469 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 APOL6Q9BWW8 343 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 PLVAPQ9BX97 442 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 NT5C1AQ9BXI3 368 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 UBXN6Q9BZV1 441 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 ELAC1Q9H777 363 aaKnown RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 CLDND1Q9NY35 253 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 STRIP2Q9ULQ0 834 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 PCDHB12Q9Y5F1 795 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 TDRD15B5MCY1 1934 aaKnown RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 A0A0C4DFX4 3053 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 PTPRSQ13332 1948 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.92□□□□□ -0.82
VPS25-205ENST00000590339 A0A0U1RQF3 1178 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 M0QYV0 167 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 SPTLC1O15269 473 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 PHF2O75151 1096 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 HEXIM1O94992 359 aaKnown RBP9.92□□□□□ -0.82
VPS25-205ENST00000590339 GJB6O95452 261 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 GLI1P08151 1106 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 SETSIPP0DME0 302 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 PYGMP11217 842 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 ATF7P17544 494 aaPredicted RBP9.92□□□□□ -0.82
VPS25-205ENST00000590339 IRS1P35568 1242 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 PBX3P40426 434 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 GPD2P43304 727 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 TAF6P49848 677 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 TAS2R40P59535 323 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 RNASE9P60153 205 aaKnown RBP9.92□□□□□ -0.82
VPS25-205ENST00000590339 SLC7A5Q01650 507 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 OGDHQ02218 1023 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 PDCLQ13371 301 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 ORC1Q13415 861 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 CAMK1Q14012 370 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 ARHGAP17Q68EM7 881 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 TWF2Q6IBS0 349 aaKnown RBP9.92□□□□□ -0.82
VPS25-205ENST00000590339 AADACL2Q6P093 401 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 MRPL10Q7Z7H8 261 aaKnown RBP9.92□□□□□ -0.82
VPS25-205ENST00000590339 ERICH1Q86X53 443 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 XYLT1Q86Y38 959 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 SLC13A5Q86YT5 568 aaPredicted RBP9.92□□□□□ -0.82
VPS25-205ENST00000590339 GSPT2Q8IYD1 628 aaKnown RBP9.92□□□□□ -0.82
VPS25-205ENST00000590339 KATNAL2Q8IYT4 538 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 ZDHHC14Q8IZN3 488 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.92□□□□□ -0.82
VPS25-205ENST00000590339 FNIP1Q8TF40 1166 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 KBTBD7Q8WVZ9 684 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 LPPQ93052 612 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 MCRS1Q96EZ8 462 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 CASD1Q96PB1 797 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 CPXM1Q96SM3 734 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 AP1M1Q9BXS5 423 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 DDX47Q9H0S4 455 aaKnown RBP9.92□□□□□ -0.82
VPS25-205ENST00000590339 LMAN2LQ9H0V9 348 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 AAASQ9NRG9 546 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 FAM105AQ9NUU6 356 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 OGFRQ9NZT2 677 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 KLK14Q9P0G3 267 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 WDR35Q9P2L0 1181 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 TJP2Q9UDY2 1190 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 PARP2Q9UGN5 583 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 IP6K2Q9UHH9 426 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 NR2E1Q9Y466 385 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 SNX9Q9Y5X1 595 aa9.92□□□□□ -0.82
VPS25-205ENST00000590339 CHD7Q9P2D1 2997 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 COL4A4P53420 1690 aaPredicted RBP9.91□□□□□ -0.82
VPS25-205ENST00000590339 GOLGA6L10A0A0M3HER8 536 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 ZSCAN5CA6NGD5 496 aaPredicted RBP9.91□□□□□ -0.82
VPS25-205ENST00000590339 FSCN2O14926 492 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 PER2O15055 1255 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 LINC01565O15544 149 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 SART1O43290 800 aaKnown RBP9.91□□□□□ -0.82
VPS25-205ENST00000590339 ZNF623O75123 536 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 ZMYND10O75800 440 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 FGF18O76093 207 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 ERBB2P04626 1255 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 FAM163BP0C2L3 166 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 WARSP23381 471 aaKnown RBP9.91□□□□□ -0.82
VPS25-205ENST00000590339 PLA2G4AP47712 749 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 RAB27AP51159 221 aa9.91□□□□□ -0.82
VPS25-205ENST00000590339 RPL7AP62424 266 aaKnown RBP9.91□□□□□ -0.82
VPS25-205ENST00000590339 MRPS25P82663 173 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms