RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PKMYT1Q99640 499 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 COLEC11Q9BWP8 271 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 MCOLN1Q9GZU1 580 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 HCSTQ9UBK5 93 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 ADAM28Q9UKQ2 775 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 VWA8A3KMH1 1905 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 NLRC5Q86WI3 1866 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 PTPRDP23468 1912 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 ABHD14A-ACY1A0A1B0GW23 586 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 EFCAB14O75071 495 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 AP1G2O75843 785 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 GABBR2O75899 941 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 DGKIO75912 1065 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 FGGP02679 453 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 CSF2RAP15509 400 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 GPD1P21695 349 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 TAS2R40P59535 323 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 SLC6A3Q01959 620 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 ZNF211Q13398 564 aaPredicted RBP12□□□□□ -0.49
SMAD4-205ENST00000588745 MAPRE1Q15691 268 aaKnown RBP12□□□□□ -0.49
SMAD4-205ENST00000588745 CLUL1Q15846 466 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 DAB2IPQ5VWQ8 1189 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 MFSD5Q6N075 450 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 CC2D1AQ6P1N0 951 aaPredicted RBP12□□□□□ -0.49
SMAD4-205ENST00000588745 UBE2Q1Q7Z7E8 422 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 MMGT1Q8N4V1 131 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 TMEM199Q8N511 208 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 GPR161Q8N6U8 529 aaKnown RBP12□□□□□ -0.49
SMAD4-205ENST00000588745 KCTD13Q8WZ19 329 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 SMARCD1Q96GM5 515 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 RBM12Q9NTZ6 932 aaKnown RBP12□□□□□ -0.49
SMAD4-205ENST00000588745 TMEM59LQ9UK28 342 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 FAN1Q9Y2M0 1017 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12□□□□□ -0.49
SMAD4-205ENST00000588745 PATJQ8NI35 1801 aa12□□□□□ -0.49
SMAD4-205ENST00000588745 ALPK3Q96L96 1907 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 SF3B1O75533 1304 aaKnown RBP eCLIP11.99□□□□□ -0.497e-6■■■■■ 33.4
SMAD4-205ENST00000588745 C2CD4BA6NLJ0 364 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 F8VP50 259 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 DPYSL4O14531 572 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 BEST1O76090 585 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 UPP2O95045 317 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 OAZ2O95190 189 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 AMHP03971 560 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 ALDH2P05091 517 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 GALTP07902 379 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 PYGMP11217 842 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 LCP1P13796 627 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 FLT3P36888 993 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 SSR1P43307 286 aaKnown RBP11.99□□□□□ -0.49
SMAD4-205ENST00000588745 ZNF143P52747 638 aaPredicted RBP11.99□□□□□ -0.49
SMAD4-205ENST00000588745 BCAR1P56945 870 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 MAP3K7CLP57077 242 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 RNASE9P60153 205 aaKnown RBP11.99□□□□□ -0.49
SMAD4-205ENST00000588745 ADIGQ0VDE8 80 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 ELAVL2Q12926 359 aaKnown RBP11.99□□□□□ -0.49
SMAD4-205ENST00000588745 LRRC38Q5VT99 294 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 FUT10Q6P4F1 479 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 SLC26A9Q7LBE3 791 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 SCUBE3Q8IX30 993 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 KATNAL2Q8IYT4 538 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 TMEM209Q96SK2 561 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 NAP1L3Q99457 506 aaPredicted RBP11.99□□□□□ -0.49
SMAD4-205ENST00000588745 SMOQ99835 787 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 PLVAPQ9BX97 442 aa11.99□□□□□ -0.49
SMAD4-205ENST00000588745 CCDC188H7C350 402 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 LRCH4O75427 683 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 GRAP2O75791 330 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 BAIAP3O94812 1187 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 FGFR3P22607 806 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 GJC1P36383 396 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 CACNA2D1P54289 1103 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 WDR5P61964 334 aaKnown RBP11.98□□□□□ -0.49
SMAD4-205ENST00000588745 ADCY1Q08828 1119 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 ACAP1Q15027 740 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 LONRF2Q1L5Z9 754 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 VARS2Q5ST30 1063 aaKnown RBP11.98□□□□□ -0.49
SMAD4-205ENST00000588745 FAM171A1Q5VUB5 890 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 ZNF280DQ6N043 979 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 TRNP1Q6NT89 227 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 AADACL2Q6P093 401 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 C4orf50Q6ZRC1 276 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 ARCQ7LC44 396 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 POLNQ7Z5Q5 900 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 SIX6OS1Q8N1H7 587 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 ZMIZ2Q8NF64 920 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 CLEC4CQ8WTT0 213 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 RXFP2Q8WXD0 754 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 ANKRD7Q92527 254 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 TOP1MTQ969P6 601 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 CNPY3Q9BT09 278 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 UBXN6Q9BZV1 441 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 ZCWPW1Q9H0M4 648 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 ANKZF1Q9H8Y5 726 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 RC3H2Q9HBD1 1191 aaKnown RBP11.98□□□□□ -0.49
SMAD4-205ENST00000588745 LRRC4Q9HBW1 653 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 CSNK1G1Q9HCP0 422 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 DMAP1Q9NPF5 467 aaPredicted RBP11.98□□□□□ -0.49
SMAD4-205ENST00000588745 IL23AQ9NPF7 189 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms