RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 KIF9Q9HAQ2 790 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 PCDHA5Q9Y5H7 936 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 CKMP06732 381 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 USP17L7P0C7H9 530 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 CHRNB1P11230 501 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 CTHP32929 405 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 ASPAP45381 313 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 ZNF268Q14587 947 aaPredicted RBP22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 TRIM68Q6AZZ1 485 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 PAQR9Q6ZVX9 377 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 RALGPS2Q86X27 583 aaPredicted RBP22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 ARL14EPQ8N8R7 260 aaPredicted RBP22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 TTC16Q8NEE8 873 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 SPATA20Q8TB22 786 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 TNIP3Q96KP6 325 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 TIGD1Q96MW7 591 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 GCNT4Q9P109 453 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 HMGXB4Q9UGU5 601 aa22.82■■□□□ 1.24
PPP4R1-228ENST00000584074 NDST1P52848 882 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 CSTF1Q05048 431 aaKnown RBP22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 ENPEPQ07075 957 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 ITPRIPL2Q3MIP1 535 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 WDR44Q5JSH3 913 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 SMARCE1Q969G3 411 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 KCNK16Q96T55 309 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 MED10Q9BTT4 135 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 CHRDQ9H2X0 955 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 EBF3Q9H4W6 596 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 APOBEC3GQ9HC16 384 aaKnown RBP22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 HPS4Q9NQG7 708 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 EHD2Q9NZN4 543 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 TRPM5Q9NZQ8 1165 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 FBXO4Q9UKT5 387 aa22.81■■□□□ 1.24
PPP4R1-228ENST00000584074 FRYLO94915 3013 aa22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 OBSL1O75147 1896 aa22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 OTOL1A6NHN0 477 aaPredicted RBP22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 CETN3O15182 167 aa22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 ARSAP15289 507 aa22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 HDCP19113 662 aa22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 CC2D1AQ6P1N0 951 aaPredicted RBP22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 C1orf228Q6PIY5 440 aa22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 TSSK4Q6SA08 328 aa22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 FAM35AQ86V20 835 aa22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 FUKQ8N0W3 1084 aa22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 RBM12Q9NTZ6 932 aaKnown RBP22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 HOOK1Q9UJC3 728 aaKnown RBP22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 ATP8B3O60423 1300 aa22.8■■□□□ 1.24
PPP4R1-228ENST00000584074 CFAP54Q96N23 3096 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 ZNF840PA6NDX5 716 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 CCDC130P13994 396 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 PMS1P54277 932 aaKnown RBP22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 MCCD1P59942 119 aaPredicted RBP22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 IFRD2Q12894 506 aaPredicted RBP22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 TAF10Q12962 218 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 RUNX3Q13761 415 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 MTF1Q14872 753 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 PON2Q15165 354 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 ZNF77Q15935 545 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 ZNF528Q3MIS6 628 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 COBLL1Q53SF7 1204 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 ANKRD40Q6AI12 368 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 CRYBG2Q8N1P7 616 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 IMPG2Q9BZV3 1241 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 TMEM8AQ9HCN3 771 aa22.79■■□□□ 1.24
PPP4R1-228ENST00000584074 DENND4CQ5VZ89 1909 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 F5P12259 2224 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 GADD45BO75293 160 aaPredicted RBP22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 ABL1P00519 1130 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 EPB41P11171 864 aaKnown RBP22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 GAS6Q14393 721 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 ISM2Q6H9L7 571 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 UNC93AQ86WB7 457 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 ADSSL1Q8N142 457 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 NUP93Q8N1F7 819 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 C12orf29Q8N999 325 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 SLC2A14Q8TDB8 520 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 SH3RF2Q8TEC5 729 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 SMARCD1Q96GM5 515 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 TWNKQ96RR1 684 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 TSG101Q99816 390 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 PRMT8Q9NR22 394 aaPredicted RBP22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 KRT82Q9NSB4 513 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 PTPRDP23468 1912 aa22.78■■□□□ 1.24
PPP4R1-228ENST00000584074 GTF2H1P32780 548 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 PPP3CCP48454 512 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 USP4Q13107 963 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 LRRC32Q14392 662 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 PDGFRLQ15198 375 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 KRT39Q6A163 491 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 ZC3H14Q6PJT7 736 aaKnown RBP22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 SCAMP5Q8TAC9 235 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 SEMA4DQ92854 862 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 CHFRQ96EP1 664 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 NIF3L1Q9GZT8 377 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 RNF38Q9H0F5 515 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 DMAP1Q9NPF5 467 aaPredicted RBP22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 FAM49BQ9NUQ9 324 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 DUS2Q9NX74 493 aaKnown RBP22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 ARHGAP26Q9UNA1 814 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 WNT6Q9Y6F9 365 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms