RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 PNPLA8Q9NP80 782 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 FBXL21Q9UKT6 434 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 KIAA1549LQ6ZVL6 1849 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 PRR33A8MZF0 331 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 GPR37L1O60883 481 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 NPR3P17342 541 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 PFKLP17858 780 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 WEE1P30291 646 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 IFRD2Q12894 506 aaPredicted RBP13.76□□□□□ -0.21
CLK3-224ENST00000568605 STILQ15468 1287 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 EXOC3L4Q17RC7 722 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 SGO2Q562F6 1265 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 TCP11X2Q5H9J9 407 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 TRIM65Q6PJ69 517 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 IRF2BP1Q8IU81 584 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 YAF2Q8IY57 180 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 SLC44A3Q8N4M1 653 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 C12orf29Q8N999 325 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 SLC4A11Q8NBS3 891 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 WHAMMQ8TF30 809 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 RSAD2Q8WXG1 361 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 OVCA2Q8WZ82 227 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 JAKMIP2Q96AA8 810 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 NDST4Q9H3R1 872 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 FBXO44Q9H4M3 255 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 TRPV4Q9HBA0 871 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 SLC2A4RGQ9NR83 387 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 COMMD8Q9NX08 183 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 OBP2AQ9NY56 170 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 TRPM5Q9NZQ8 1165 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 APEX2Q9UBZ4 518 aa13.76□□□□□ -0.21
CLK3-224ENST00000568605 NCANO14594 1321 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 TRAV19A0A0A6YYK7 116 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 TMEM221A6NGB7 291 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 M0R296 226 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 F11P03951 625 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 CKMP06732 381 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 PAEPP09466 180 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 CD19P15391 556 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 PSMC3P17980 439 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 RFX1P22670 979 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 FCARP24071 287 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 YWHAQP27348 245 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 SLC5A3P53794 718 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 CACNA2D1P54289 1103 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 RAD23BP54727 409 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 MAP3K7CLP57077 242 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 SKOR2Q2VWA4 1001 aaPredicted RBP13.75□□□□□ -0.21
CLK3-224ENST00000568605 VWA3BQ502W6 1294 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 HSP90AA4PQ58FG1 418 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 STXBP5Q5T5C0 1151 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 SMYD5Q6GMV2 418 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 TMEM270Q6UE05 265 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 CLEC20AQ6ZU45 233 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 C11orf57Q6ZUT1 292 aaPredicted RBP13.75□□□□□ -0.21
CLK3-224ENST00000568605 CMTM8Q8IZV2 173 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 MAB21L3Q8N8X9 362 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 LMO3Q8TAP4 145 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 DNASE1L2Q92874 299 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 MFSD1Q9H3U5 465 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 CSNK1G1Q9HCP0 422 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 TRPC7Q9HCX4 862 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 HESX1Q9UBX0 185 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 KIAA1257Q9ULG3 409 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 PCDHB4Q9Y5E5 795 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 TRIOO75962 3097 aa13.75□□□□□ -0.21
CLK3-224ENST00000568605 TADA3O75528 432 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 VDRP11473 427 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 BCAT1P54687 386 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 MFAP3P55082 362 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 PPP1R26Q5T8A7 1209 aaPredicted RBP13.74□□□□□ -0.21
CLK3-224ENST00000568605 ARHGAP17Q68EM7 881 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 TANGO2Q6ICL3 276 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 PAQR9Q6ZVX9 377 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 RRAGAQ7L523 313 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 MON1AQ86VX9 555 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 ARID3BQ8IVW6 561 aaPredicted RBP13.74□□□□□ -0.21
CLK3-224ENST00000568605 ARHGEF19Q8IW93 802 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 SUGP1Q8IWZ8 645 aaKnown RBP13.74□□□□□ -0.21
CLK3-224ENST00000568605 CELF5Q8N6W0 485 aaKnown RBP13.74□□□□□ -0.21
CLK3-224ENST00000568605 UBR7Q8N806 425 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 IRF7Q92985 503 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 FBXO32Q969P5 355 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 ZSWIM3Q96MP5 696 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 KCNK16Q96T55 309 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 CRACR2AQ9BSW2 395 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 TRMT61BQ9BVS5 477 aaKnown RBP13.74□□□□□ -0.21
CLK3-224ENST00000568605 DUSP16Q9BY84 665 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 BRD9Q9H8M2 597 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 SAMSN1Q9NSI8 373 aaKnown RBP13.74□□□□□ -0.21
CLK3-224ENST00000568605 TMEM30AQ9NV96 361 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 WNT16Q9UBV4 365 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 COL4A3Q01955 1670 aa13.74□□□□□ -0.21
CLK3-224ENST00000568605 ZDBF2Q9HCK1 2354 aa13.73□□□□□ -0.21
CLK3-224ENST00000568605 FAM86C2PA6NEL3 165 aa13.73□□□□□ -0.21
CLK3-224ENST00000568605 HEPACAM2A8MVW5 462 aa13.73□□□□□ -0.21
CLK3-224ENST00000568605 NARSO43776 548 aaKnown RBP13.73□□□□□ -0.21
CLK3-224ENST00000568605 CFHP08603 1231 aa13.73□□□□□ -0.21
CLK3-224ENST00000568605 KRT5P13647 590 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms