RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 GVINP1Q7Z2Y8 2422 aa16.71■□□□□ 0.27
USB1-208ENST00000563207 ZNF638Q14966 1978 aaKnown RBP16.7■□□□□ 0.26
USB1-208ENST00000563207 MYBPHLA2RUH7 354 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 SMTNL1A8MU46 457 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 MAN2B1O00754 1011 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 CHADO15335 359 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 F11P03951 625 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 EEF1GP26641 437 aaKnown RBP16.7■□□□□ 0.26
USB1-208ENST00000563207 GCLMP48507 274 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 MXI1P50539 228 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 SATB1Q01826 763 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 DMWDQ09019 674 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 SOWAHAQ2M3V2 549 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 ZNF528Q3MIS6 628 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 TXNDC8Q6A555 127 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 Q6ZS52 159 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 IRF2BP1Q8IU81 584 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 YAF2Q8IY57 180 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 MAB21L3Q8N8X9 362 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 ZBTB44Q8NCP5 570 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 CCDC150Q8NCX0 1101 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 FBXL13Q8NEE6 735 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 SPPL2BQ8TCT7 592 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 CSGALNACT1Q8TDX6 532 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 CHFRQ96EP1 664 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 FAXDC2Q96IV6 333 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 CHRDQ9H2X0 955 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 PRMT8Q9NR22 394 aaPredicted RBP16.7■□□□□ 0.26
USB1-208ENST00000563207 COQ4Q9Y3A0 265 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 NME7Q9Y5B8 376 aa16.7■□□□□ 0.26
USB1-208ENST00000563207 EP300Q09472 2414 aaPredicted RBP16.69■□□□□ 0.26
USB1-208ENST00000563207 OTOL1A6NHN0 477 aaPredicted RBP16.69■□□□□ 0.26
USB1-208ENST00000563207 SPECC1L-ADORA2AF8WAN1 911 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 NCAM2O15394 837 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 HUS1O60921 280 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 TADA3O75528 432 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 P4HA1P13674 534 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 FMO5P49326 533 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 ZNF165P49910 485 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 KPNA1P52294 538 aaPredicted RBP16.69■□□□□ 0.26
USB1-208ENST00000563207 VEPH1Q14D04 833 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 PON2Q15165 354 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 INTS6LQ5JSJ4 861 aaKnown RBP16.69■□□□□ 0.26
USB1-208ENST00000563207 TRIM68Q6AZZ1 485 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 ZC3H14Q6PJT7 736 aaKnown RBP16.69■□□□□ 0.26
USB1-208ENST00000563207 DCP1BQ8IZD4 617 aaKnown RBP16.69■□□□□ 0.26
USB1-208ENST00000563207 TMEM86AQ8N2M4 240 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 TOP6BLQ8N6T0 577 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 KBTBD7Q8WVZ9 684 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 ELMO3Q96BJ8 720 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 SLC22A12Q96S37 553 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 XYLT2Q9H1B5 865 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 SEMA4AQ9H3S1 761 aa16.69■□□□□ 0.26
USB1-208ENST00000563207 GREB1Q4ZG55 1949 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 DPYSL4O14531 572 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 GABRDO14764 452 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 LILRB5O75023 590 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 VNN1O95497 513 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 ASS1P00966 412 aaKnown RBP16.68■□□□□ 0.26
USB1-208ENST00000563207 HLA-DRAP01903 254 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 AFPP02771 609 aaKnown RBP16.68■□□□□ 0.26
USB1-208ENST00000563207 CTHP32929 405 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 PIK3CAP42336 1068 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 MTIF2P46199 727 aaKnown RBP16.68■□□□□ 0.26
USB1-208ENST00000563207 PSMC1P62191 440 aaKnown RBP16.68■□□□□ 0.26
USB1-208ENST00000563207 KCNH2Q12809 1159 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 TAF12Q16514 161 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 ARHGAP15Q53QZ3 475 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 CDKAL1Q5VV42 579 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 LIMS2Q7Z4I7 341 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 ADGRF2Q8IZF7 708 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 CMTM8Q8IZV2 173 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 ANKRD20A12PQ8NF67 263 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 BPIFB1Q8TDL5 484 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 C2orf15Q8WU43 125 aaKnown RBP16.68■□□□□ 0.26
USB1-208ENST00000563207 USP13Q92995 863 aaPredicted RBP16.68■□□□□ 0.26
USB1-208ENST00000563207 E2F7Q96AV8 911 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 RMDN1Q96DB5 314 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 CYP2S1Q96SQ9 504 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 HINFPQ9BQA5 517 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 ACBD6Q9BR61 282 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 CRTAC1Q9NQ79 661 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 GKN1Q9NS71 199 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 SAMSN1Q9NSI8 373 aaKnown RBP16.68■□□□□ 0.26
USB1-208ENST00000563207 RAB20Q9NX57 234 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 ZSCAN32Q9NX65 697 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 ANAPC1Q9H1A4 1944 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 OTOGLQ3ZCN5 2332 aa16.68■□□□□ 0.26
USB1-208ENST00000563207 DNAH14Q0VDD8 3507 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 BECN2A8MW95 431 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 KCNJ18B7U540 433 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 PDGFRBP09619 1106 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 CDC25CP30307 473 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 MAGEA9P43362 315 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 ID4P47928 161 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 MYL6P60660 151 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 TNNC1P63316 161 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 TSPY1Q01534 308 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 SRSF5Q13243 272 aaKnown RBP16.67■□□□□ 0.26
USB1-208ENST00000563207 KCNJ12Q14500 433 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms