RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 TNMDQ9H2S6 317 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 LINC00597Q9H2U6 94 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 KIAA1586Q9HCI6 787 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 ARHGAP26Q9UNA1 814 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 INVSQ9Y283 1065 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 OBSL1O75147 1896 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 RALGAPA1Q6GYQ0 2036 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 LEFTY2O00292 366 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 GNL1P36915 607 aaPredicted RBP13.86□□□□□ -0.19
SF3B3-202ENST00000562722 CYP2J2P51589 502 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 USP46P62068 366 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 TNNC1P63316 161 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 AMPD3Q01432 767 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 PLA2G2CQ5R387 149 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 TRAPPC11Q7Z392 1133 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 OR6B3Q8NGW1 331 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 MYCBPAPQ8TBZ2 947 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 EZH1Q92800 747 aaPredicted RBP13.86□□□□□ -0.19
SF3B3-202ENST00000562722 CCDC127Q96BQ5 260 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 PCED1BQ96HM7 432 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 TPSD1Q9BZJ3 242 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 DUSP15Q9H1R2 295 aaPredicted RBP13.86□□□□□ -0.19
SF3B3-202ENST00000562722 ZSCAN16Q9H4T2 348 aaPredicted RBP13.86□□□□□ -0.19
SF3B3-202ENST00000562722 SMPD4Q9NXE4 827 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 ANGPTL2Q9UKU9 493 aa13.86□□□□□ -0.19
SF3B3-202ENST00000562722 CIZ1Q9ULV3 898 aaPredicted RBP13.86□□□□□ -0.19
SF3B3-202ENST00000562722 F8VP50 259 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 SCAMP3O14828 347 aaKnown RBP13.85□□□□□ -0.19
SF3B3-202ENST00000562722 CAVIN2O95810 425 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 TRPC3Q13507 836 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 SNRNP35Q16560 246 aaKnown RBP13.85□□□□□ -0.19
SF3B3-202ENST00000562722 USP39Q53GS9 565 aaKnown RBP13.85□□□□□ -0.19
SF3B3-202ENST00000562722 N4BP2L1Q5TBK1 243 aaPredicted RBP13.85□□□□□ -0.19
SF3B3-202ENST00000562722 TDRD10Q5VZ19 366 aaKnown RBP13.85□□□□□ -0.19
SF3B3-202ENST00000562722 ANO7Q6IWH7 933 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 LIMS2Q7Z4I7 341 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 FILIP1Q7Z7B0 1213 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 CCDC33Q8N5R6 958 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 DHX58Q96C10 678 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 CEP295NLQ96MC4 621 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 MRPL45Q9BRJ2 306 aaKnown RBP13.85□□□□□ -0.19
SF3B3-202ENST00000562722 EDEM2Q9BV94 578 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 TRIM9Q9C026 710 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 EBF1Q9UH73 591 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 MTMR6Q9Y217 621 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 CPQQ9Y646 472 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 DENND4CQ5VZ89 1909 aa13.85□□□□□ -0.19
SF3B3-202ENST00000562722 ZNF840PA6NDX5 716 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 SLC9A3R1O14745 358 aaPredicted RBP13.84□□□□□ -0.19
SF3B3-202ENST00000562722 CLIC2O15247 247 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 SPTLC2O15270 562 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 EIF3DO15371 548 aaKnown RBP eCLIP13.84□□□□□ -0.19
SF3B3-202ENST00000562722 STX6O43752 255 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 TCF3P15923 654 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 PFKLP17858 780 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 PPP3CCP48454 512 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 NASPP49321 788 aaPredicted RBP13.84□□□□□ -0.19
SF3B3-202ENST00000562722 WDR72Q3MJ13 1102 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 FAM26FQ5R3K3 315 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 C11orf74Q86VG3 221 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 NELFCDQ8IXH7 590 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 USP33Q8TEY7 942 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 C8orf48Q96LL4 319 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 SLITRK1Q96PX8 696 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 CGRRF1Q99675 332 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 ELOVL4Q9GZR5 314 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 CUEDC2Q9H467 287 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 AGPAT3Q9NRZ7 376 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 CFAP97Q9P2B7 532 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 NXF1Q9UBU9 619 aaKnown RBP13.84□□□□□ -0.19
SF3B3-202ENST00000562722 MORC2Q9Y6X9 1032 aaPredicted RBP13.84□□□□□ -0.19
SF3B3-202ENST00000562722 GREB1Q4ZG55 1949 aa13.84□□□□□ -0.19
SF3B3-202ENST00000562722 TPRP12270 2363 aaKnown RBP13.83□□□□□ -0.19
SF3B3-202ENST00000562722 SDK1Q7Z5N4 2213 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 ACACBO00763 2458 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 ATG2BQ96BY7 2078 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 CACNA1BQ00975 2339 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 BCLAF3A2AJT9 711 aaKnown RBP13.83□□□□□ -0.2
SF3B3-202ENST00000562722 A8MXQ7 604 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 K7EQS6 105 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 PHACTR2O75167 634 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 ALDH1A2O94788 518 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 KCNK5O95279 499 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 CST3P01034 146 aaPredicted RBP13.83□□□□□ -0.2
SF3B3-202ENST00000562722 CYP17A1P05093 508 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 MBL2P11226 248 aaPredicted RBP13.83□□□□□ -0.2
SF3B3-202ENST00000562722 PTPN1P18031 435 aaKnown RBP13.83□□□□□ -0.2
SF3B3-202ENST00000562722 HOXD13P35453 343 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 OPRD1P41143 372 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 NOP14P78316 857 aaKnown RBP13.83□□□□□ -0.2
SF3B3-202ENST00000562722 ZXDBP98169 803 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 CYP24A1Q07973 514 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 TAF10Q12962 218 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 PSMD6Q15008 389 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 CYP2U1Q7Z449 544 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 IQUBQ8NA54 791 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 XXYLT1Q8NBI6 393 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 LINC00301Q8NCQ3 95 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 INTS4Q96HW7 963 aaKnown RBP13.83□□□□□ -0.2
SF3B3-202ENST00000562722 ZNF396Q96N95 335 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms