RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 TANGO2Q6ICL3 276 aa16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 PHLDB3Q6NSJ2 640 aa16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 GJB7Q6PEY0 223 aa16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 TMEM150AQ86TG1 271 aa16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 SLC44A3Q8N4M1 653 aa16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 UBR7Q8N806 425 aa16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 MAB21L3Q8N8X9 362 aa16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 MRPS31Q92665 395 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 EDAQ92838 391 aa16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 SMARCD2Q92925 531 aa16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 HNRNPABQ99729 332 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 VPS16Q9H269 839 aa16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 MUC3AQ02505 3323 aa16.8■□□□□ 0.28
RABGGTA-206ENST00000558649 LETM1O95202 739 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 ABL1P00519 1130 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 CALCAP01258 141 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 TPM2P07951 284 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 CFHP08603 1231 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 KRT5P13647 590 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 FCARP24071 287 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 SLC5A3P53794 718 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 GCNT1Q02742 428 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 GRM2Q14416 872 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 KRT31Q15323 416 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 GOLGA7BQ2TAP0 167 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 SGO2Q562F6 1265 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 TXNDC8Q6A555 127 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 CLEC20AQ6ZU45 233 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 UBALD2Q8IYN6 164 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 NUP93Q8N1F7 819 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 RBBP8NLQ8NC74 664 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 TTC16Q8NEE8 873 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 NXPE3Q969Y0 559 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 MYRFLQ96LU7 910 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 KREMEN1Q96MU8 473 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 PLA2G2FQ9BZM2 168 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 GPR88Q9GZN0 384 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 SMG9Q9H0W8 520 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 FAM124BQ9H5Z6 455 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 TASP1Q9H6P5 420 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 ZFP14Q9HCL3 533 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 DUSP12Q9UNI6 340 aa16.79■□□□□ 0.28
RABGGTA-206ENST00000558649 ANAPC1Q9H1A4 1944 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 CDK11BP21127 795 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 ACO1P21399 889 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 PON1P27169 355 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 YWHAQP27348 245 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 ARHGAP44Q17R89 818 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 TRIM67Q6ZTA4 783 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 ARID3BQ8IVW6 561 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 ZMIZ2Q8NF64 920 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 ANKRD20A12PQ8NF67 263 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 SCAMP5Q8TAC9 235 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 FBXO32Q969P5 355 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 ELSPBP1Q96BH3 223 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 CEP295NLQ96MC4 621 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 SLC46A2Q9BY10 475 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 EHD2Q9NZN4 543 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 APEX2Q9UBZ4 518 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 FBXL21Q9UKT6 434 aa16.78■□□□□ 0.28
RABGGTA-206ENST00000558649 NCANO14594 1321 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 GTPBP10A4D1E9 387 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 C2orf78A6NCI8 922 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 DPYSL4O14531 572 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 ECI2O75521 394 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 RTN3O95197 1032 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 PRAMEF12O95522 483 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 NPR3P17342 541 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 AVPR1AP37288 418 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 USP8P40818 1118 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 MFAP3P55082 362 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 SIGLEC14Q08ET2 396 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 TAF10Q12962 218 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 SKOR2Q2VWA4 1001 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 GPRIN1Q7Z2K8 1008 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 CMTM8Q8IZV2 173 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 SLITRK1Q96PX8 696 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 TTLL2Q9BWV7 592 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 C1QTNF1Q9BXJ1 281 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 DUSP16Q9BY84 665 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 CSNK1G1Q9HCP0 422 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 TRPM5Q9NZQ8 1165 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 TSPAN16Q9UKR8 245 aa16.77■□□□□ 0.28
RABGGTA-206ENST00000558649 HELZP42694 1942 aaKnown RBP16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 NCOR1O75376 2440 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 TMEM221A6NGB7 291 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 HEPACAM2A8MVW5 462 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 RNF225M0QZC1 329 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 M0R296 226 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 TNFRSF10BO14763 440 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 CKMP06732 381 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 VDRP11473 427 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 SRFP11831 508 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 BRD2P25440 801 aaKnown RBP16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 DDX6P26196 483 aaKnown RBP eCLIP16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 ZNF165P49910 485 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 GPC5P78333 572 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 NCAPHQ15003 741 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 ZSCAN23Q3MJ62 389 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 ARHGAP17Q68EM7 881 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms