RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PFKFB3Q16875 520 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TCHHL1Q5QJ38 904 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SEPT12Q8IYM1 358 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 EXT2Q93063 718 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 RMND5BQ96G75 393 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 OSBPL7Q9BZF2 842 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 DCLK3Q9C098 648 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CHST12Q9NRB3 414 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 GNEQ9Y223 722 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 A0A1B0GVG6 124 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PHF2O75151 1096 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SLC9A4Q6AI14 798 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ZFP1Q6P2D0 407 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 C1GALT1C1Q96EU7 318 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 DMRTB1Q96MA1 342 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ITM2CQ9NQX7 267 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ITM2BQ9Y287 266 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TOP3BO95985 862 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ZBED1O96006 694 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 LSAMPQ13449 338 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF790Q6PG37 636 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CLEC4MQ9H2X3 399 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PGM3O95394 542 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SEC24AO95486 1093 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 JCHAINP01591 159 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SPANXN2Q5MJ10 180 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 APTXQ7Z2E3 356 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 FGD2Q7Z6J4 655 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 LRRC49Q8IUZ0 686 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TNIP2Q8NFZ5 429 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 AMNQ9BXJ7 453 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MLXQ9UH92 298 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TMCC2O75069 709 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MED26O95402 600 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SOX6P35712 828 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MAPK11Q15759 364 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PTPN20Q4JDL3 420 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SARS2Q9NP81 518 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SEC31BQ9NQW1 1179 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SACM1LQ9NTJ5 587 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 IL6P05231 212 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SPRP35270 261 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CDH6P55285 790 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ASB12Q8WXK4 309 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CPVLQ9H3G5 476 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 FAM8A1Q9UBU6 413 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 DNAJC13O75165 2243 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 LOC100506127A0A0U1RQW1 187 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 BMP6P22004 513 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 UBXN2AP68543 259 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TNFAIP8L3Q5GJ75 292 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 FAM45BPQ6NSW5 357 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 RPF1Q9H9Y2 349 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MOV10Q9HCE1 1003 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 C8orf4Q9NR00 106 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ZHX2Q9Y6X8 837 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ALAS1P13196 640 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PTPN7P35236 360 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 RPL21P46778 160 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CLCN2P51788 898 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ZBTB46Q86UZ6 589 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 THNSL1Q8IYQ7 743 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 APPL2Q8NEU8 664 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PCDHA3Q9Y5H8 950 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SYNDIG1LA6NDD5 238 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 FAM205CA6NFA0 338 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MAGEA8P43361 318 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PSMC6P62333 389 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 BNC1Q01954 994 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 RNFT2Q96EX2 444 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TMEM47Q9BQJ4 181 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SIK2Q9H0K1 926 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SPASTQ9UBP0 616 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 OSBPP22059 807 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 NUP62P37198 522 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ARPP19P56211 112 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 LRRC74AQ0VAA2 488 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF284Q2VY69 593 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 C4orf22Q6V702 233 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CENPIQ92674 756 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PHF21AQ96BD5 680 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ERGIC2Q96RQ1 377 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PI4K2AQ9BTU6 479 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PNMA8CA0A1B0GUJ8 204 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 HSPA1AP0DMV8 641 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 HSPA1BP0DMV9 641 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TRIM9Q9C026 710 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 DHX35Q9H5Z1 703 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 NMRK1Q9NWW6 199 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 C1QBPQ07021 282 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PRKG1Q13976 671 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MAPRE2Q15555 327 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PRUNE1Q86TP1 453 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 OR6B3Q8NGW1 331 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 KCNS3Q9BQ31 491 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MAP3K1Q13233 1512 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 H0YCG3 227 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MTSS1O43312 755 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CCDC166P0CW27 439 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms