RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 CD101Q93033 1021 aa14.41□□□□□ -0.1
CALCOCO1-214ENST00000549613 PCED1BQ96HM7 432 aa14.41□□□□□ -0.1
CALCOCO1-214ENST00000549613 PSMB7Q99436 277 aa14.41□□□□□ -0.1
CALCOCO1-214ENST00000549613 NAP1L3Q99457 506 aaPredicted RBP14.41□□□□□ -0.1
CALCOCO1-214ENST00000549613 F8W810 466 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 TULP2O00295 520 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 PSTPIP1O43586 416 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 TADA3O75528 432 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 FBXO21O94952 628 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 GPD1P21695 349 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 PSMA2P25787 234 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 PEX5P50542 639 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 WDR5P61964 334 aaKnown RBP14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 MRPL58Q14197 206 aaKnown RBP14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 PTPROQ16827 1216 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 VARS2Q5ST30 1063 aaKnown RBP14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 LRRC38Q5VT99 294 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 ZNF280DQ6N043 979 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 CC2D1AQ6P1N0 951 aaPredicted RBP14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 FUT10Q6P4F1 479 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 CLEC20AQ6ZU45 233 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 FAM183BPQ6ZVS7 135 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 ARCQ7LC44 396 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 SPATA2LQ8IUW3 424 aaPredicted RBP14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 RASGEF1CQ8N431 466 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 MYLPFQ96A32 169 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 PKMYT1Q99640 499 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 ZCWPW1Q9H0M4 648 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 METTL5Q9NRN9 209 aaKnown RBP14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 KRT82Q9NSB4 513 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 ASNSD1Q9NWL6 643 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 MARCH5Q9NX47 278 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 TJP2Q9UDY2 1190 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 TTC7AQ9ULT0 858 aaPredicted RBP14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 USTQ9Y2C2 406 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 SZT2Q5T011 3432 aa14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 FNDC1Q4ZHG4 1894 aaPredicted RBP14.4□□□□□ -0.1
CALCOCO1-214ENST00000549613 CLDN5O00501 218 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 PAPSS1O43252 624 aaPredicted RBP14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 SART1O43290 800 aaKnown RBP14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 RNF8O76064 485 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 GJB6O95452 261 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 ACRP10323 421 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 LCP1P13796 627 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 LAG3P18627 525 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 CETN2P41208 172 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 SSR1P43307 286 aaKnown RBP14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 ZNF143P52747 638 aaPredicted RBP14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 FPGSQ05932 587 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 SMARCB1Q12824 385 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 HADHQ16836 314 aaKnown RBP14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 CTXN3Q4LDR2 81 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 SPOUT1Q5T280 376 aaKnown RBP14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 SEL1L2Q5TEA6 688 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 CCDC70Q6NSX1 233 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 OLFML1Q6UWY5 402 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 SLC26A9Q7LBE3 791 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 CEP57Q86XR8 500 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 SCUBE3Q8IX30 993 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 SIX6OS1Q8N1H7 587 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 OR10T2Q8NGX3 314 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 JOSD2Q8TAC2 188 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 ZNF689Q96CS4 500 aaPredicted RBP14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.39□□□□□ -0.111e-6■■■■□ 23.5
CALCOCO1-214ENST00000549613 TRIM7Q9C029 511 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 CWH43Q9H720 699 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 CSNK1G1Q9HCP0 422 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 TMEM59LQ9UK28 342 aa14.39□□□□□ -0.11
CALCOCO1-214ENST00000549613 LTBP2Q14767 1821 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 MKI67P46013 3256 aaKnown RBP14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 PGRMC1O00264 195 aaKnown RBP14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 PDE2AO00408 941 aaPredicted RBP14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 PIK3R2O00459 728 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 GLI1P08151 1106 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 PDGFRAP16234 1089 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 MAP3K7CLP57077 242 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 RNASE9P60153 205 aaKnown RBP14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 BTG3Q14201 252 aaPredicted RBP14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 USP41Q3LFD5 358 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 ANKS3Q6ZW76 656 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 RSRC2Q7L4I2 434 aaKnown RBP14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 LRRTM3Q86VH5 581 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 SPATA4Q8NEY3 305 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 KRT35Q92764 455 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 FUBP3Q96I24 572 aaKnown RBP eCLIP14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 ZNF558Q96NG5 402 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 SMOQ99835 787 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 CNPY3Q9BT09 278 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 TTPALQ9BTX7 342 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 HTATIP2Q9BUP3 242 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 GPR62Q9BZJ7 368 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 PNPLA8Q9NP80 782 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 DMAP1Q9NPF5 467 aaPredicted RBP14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 CNGB3Q9NQW8 809 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 AAASQ9NRG9 546 aa14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 DDX56Q9NY93 547 aaKnown RBP14.38□□□□□ -0.11
CALCOCO1-214ENST00000549613 C2CD4BA6NLJ0 364 aa14.37□□□□□ -0.11
CALCOCO1-214ENST00000549613 NT5C1B-RDH14C9J2C7 533 aa14.37□□□□□ -0.11
CALCOCO1-214ENST00000549613 F8VP50 259 aa14.37□□□□□ -0.11
CALCOCO1-214ENST00000549613 CCDC188H7C350 402 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms