RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 FAM171BQ6P995 826 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 PSRC1Q6PGN9 363 aaPredicted RBP8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 TAS1R1Q7RTX1 841 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 PHLDB2Q86SQ0 1253 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 FAM35AQ86V20 835 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 LRRTM3Q86VH5 581 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 FUKQ8N0W3 1084 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 TXLNBQ8N3L3 684 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 COLGALT1Q8NBJ5 622 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 TPCN2Q8NHX9 752 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 SLC35G2Q8TBE7 412 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 SLC2A14Q8TDB8 520 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 TNIP3Q96KP6 325 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 B3GALT6Q96L58 329 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 B3GNT5Q9BYG0 378 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 ZNF518BQ9C0D4 1074 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 PRDM9Q9NQV7 894 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 TMEM30AQ9NV96 361 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 MYO1AQ9UBC5 1043 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 CNOT8Q9UFF9 292 aaKnown RBP8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 DNAI1Q9UI46 699 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 DSEQ9UL01 958 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 ATG2AQ2TAZ0 1938 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 SF3B1O75533 1304 aaKnown RBP eCLIP8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 RANBP2P49792 3224 aaKnown RBP8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 ARHGEF37A1IGU5 675 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 KIF2AO00139 706 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 DLL1O00548 723 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 SYN3O14994 580 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 KIF5CO60282 957 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PALMO75781 387 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 BEST1O76090 585 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 MTA2O94776 668 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 OAZ2O95190 189 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 GJB5O95377 273 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 OR4Q2P0C623 313 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PCSK1P29120 753 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 GABRB2P47870 512 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 RGS7P49802 495 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 CACNA2D1P54289 1103 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 BCAT1P54687 386 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 GSCP56915 257 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PRR20EP86478 221 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PRR20CP86479 221 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PRR20DP86480 221 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PRR20BP86481 221 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PRR20AP86496 221 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 YWHAHQ04917 246 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 BST2Q10589 180 aaKnown RBP8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PDCLQ13371 301 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 BTG3Q14201 252 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 RTP2Q5QGT7 225 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 CYP4A22Q5TCH4 519 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 RASIP1Q5U651 963 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 FAM171A1Q5VUB5 890 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PLEKHA7Q6IQ23 1121 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PMF1Q6P1K2 205 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 KCNT2Q6UVM3 1135 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 METTL23Q86XA0 190 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 XYLT1Q86Y38 959 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 CPNE8Q86YQ8 564 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 RHOT2Q8IXI1 618 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 SLC39A11Q8N1S5 342 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 RNF10Q8N5U6 811 aaKnown RBP8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 FAM160A2Q8N612 972 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 LRRC57Q8N9N7 239 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 ANKRD52Q8NB46 1076 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 ZMIZ2Q8NF64 920 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 SLC35F5Q8WV83 523 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 MYLPFQ96A32 169 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PCED1BQ96HM7 432 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 IGSF21Q96ID5 467 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 VCPIP1Q96JH7 1222 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 BTBD6Q96KE9 485 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 YME1L1Q96TA2 773 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 HNRNPABQ99729 332 aaKnown RBP8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 ACBD6Q9BR61 282 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 NUP85Q9BW27 656 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 RHOBTB2Q9BYZ6 727 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 TRIM7Q9C029 511 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 GOLPH3Q9H4A6 298 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 ADAM22Q9P0K1 906 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 CEP83Q9Y592 693 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PCDHGC5Q9Y5F6 944 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 PLXNA3P51805 1871 aa8.55□□□□□ -1.04
DEPDC4-207ENST00000549249 COL4A4P53420 1690 aaPredicted RBP8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 E5RJQ4 531 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 TRAPPC3O43617 180 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 TBC1D4O60343 1298 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 BUB1BO60566 1050 aaPredicted RBP8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 CALB1P05937 261 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 SETSIPP0DME0 302 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 MYBL1P10243 752 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 LAG3P18627 525 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 NOP2P46087 812 aaKnown RBP8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 RPL34P49207 117 aaKnown RBP8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 RABGGTBP53611 331 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 PLCB3Q01970 1234 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 MAMLD1Q13495 774 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms