RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MFSD5Q6N075 450 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 MTDHQ86UE4 582 aaKnown RBP14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 CHST13Q8NET6 341 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 MECRQ9BV79 373 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 GRID1Q9ULK0 1009 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 KBTBD13C9JR72 458 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 ITGBL1O95965 494 aaPredicted RBP14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 ZBED1O96006 694 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 AKAP5P24588 427 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 MXD4Q14582 209 aaPredicted RBP14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 KBTBD12Q3ZCT8 623 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 SYDE1Q6ZW31 735 aaPredicted RBP14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 TRABD2AQ86V40 505 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 ARFGAP1Q8N6T3 406 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 C3orf20Q8ND61 904 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 PPP1R14CQ8TAE6 165 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 CPT1BQ92523 772 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 GPR20Q99678 358 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 ARMCX1Q9P291 453 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 CACNG4Q9UBN1 327 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 TSPAN16Q9UKR8 245 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 ALDH3A1P30838 453 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 BCAR1P56945 870 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 ROR1Q01973 937 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 MGAT5Q09328 741 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 CCDC142Q17RM4 750 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 MROH9Q5TGP6 573 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 IGDCC3Q8IVU1 814 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 NSMCE1Q8WV22 266 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 PSMC3IPQ9P2W1 217 aaPredicted RBP14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 KIAA1217Q5T5P2 1943 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 PPEF2O14830 753 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 PMM2O15305 246 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 LPXNO60711 386 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 TOP3BO95985 862 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 KRT7P08729 469 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 PYGBP11216 843 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 ADCYAP1R1P41586 468 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 IFRD2Q12894 506 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 ITIH4Q14624 930 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 MAP1SQ66K74 1059 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 SUGP1Q8IWZ8 645 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 ZNF395Q9H8N7 513 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 RNF181Q9P0P0 153 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 KCNG1Q9UIX4 513 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 CPSF3Q9UKF6 684 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 ATP8B3O60423 1300 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 QSER1Q2KHR3 1735 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 MED7O43513 233 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 HMGCRP04035 888 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 SAT1P21673 171 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 PHBP35232 272 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 RAD23BP54727 409 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 RTP1P59025 263 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 GPX6P59796 221 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 PTK7Q13308 1070 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 GOLGA7BQ2TAP0 167 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 ATP11CQ8NB49 1132 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 CCNYQ8ND76 341 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 AGR3Q8TD06 166 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 CLEC4CQ8WTT0 213 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 MAGEB18Q96M61 343 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 SHCBP1LQ9BZQ2 653 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 FBXO6Q9NRD1 293 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 SLC17A6Q9P2U8 582 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 SIX4Q9UIU6 781 aa14.29□□□□□ -0.12
PRPF40B-209ENST00000548825 ATP2A2P16615 1042 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 TFE3P19532 575 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 BGNP21810 368 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 RBL1P28749 1068 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 EPHB2P29323 1055 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 FAAP100Q0VG06 881 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 TMEM132DQ14C87 1099 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 TAF1BQ53T94 588 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 RNASEH2BQ5TBB1 312 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 FYB2Q5VWT5 728 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 CGB2Q6NT52 195 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 ZCCHC23Q6ZST2 131 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 NME8Q8N427 588 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 DNERQ8NFT8 737 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 TMEM176AQ96HP8 235 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 EVPLQ92817 2033 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 UGT1A9O60656 530 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 ANP32DO95626 131 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 GEMIN4P57678 1058 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 SESN2P58004 480 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 CES3Q6UWW8 571 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 PPIL6Q8IXY8 311 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 DTX3LQ8TDB6 740 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 LENG1Q96BZ8 264 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 AGAP3Q96P47 875 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 UGT1A7Q9HAW7 530 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 UGT1A10Q9HAW8 530 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 UGT1A8Q9HAW9 530 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 GOLGA2P5Q9HBQ8 144 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 ACKR2O00590 384 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 ARF4P18085 180 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 OAZ1P54368 228 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 MXRA7P84157 204 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms