RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 AP5Z1O43299 807 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 KLF8O95600 359 aaPredicted RBP18.11■□□□□ 0.49
VPS29-204ENST00000548259 BMP15O95972 392 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 KRT19P08727 400 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 RBP5P82980 135 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 MYO1EQ12965 1108 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 MCM6Q14566 821 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 DUOXA1Q1HG43 343 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 ZC2HC1CQ53FD0 456 aaPredicted RBP18.11■□□□□ 0.49
VPS29-204ENST00000548259 SLC36A4Q6YBV0 504 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 TRMT11Q7Z4G4 463 aaKnown RBP18.11■□□□□ 0.49
VPS29-204ENST00000548259 DDX42Q86XP3 938 aaKnown RBP eCLIP18.11■□□□□ 0.49
VPS29-204ENST00000548259 ALLCQ8N6M5 410 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 TXNDC5Q8NBS9 432 aaKnown RBP18.11■□□□□ 0.49
VPS29-204ENST00000548259 LARP4BQ92615 738 aaKnown RBP18.11■□□□□ 0.49
VPS29-204ENST00000548259 RAD54LQ92698 747 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 SPATA17Q96L03 361 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 FAM213AQ9BRX8 229 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 MAGEC2Q9UBF1 373 aaPredicted RBP18.11■□□□□ 0.49
VPS29-204ENST00000548259 SLC6A14Q9UN76 642 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 ATG2BQ96BY7 2078 aa18.11■□□□□ 0.49
VPS29-204ENST00000548259 FASNP49327 2511 aaKnown RBP18.1■□□□□ 0.49
VPS29-204ENST00000548259 MYH11P35749 1972 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 TSC2P49815 1807 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 OPHN1O60890 802 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 KAT7O95251 611 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 HOXB3P14651 431 aaPredicted RBP18.1■□□□□ 0.49
VPS29-204ENST00000548259 PLCG1P19174 1290 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 TIE1P35590 1138 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 GRIK1P39086 918 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 GRIA2P42262 883 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 TNFRSF4P43489 277 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 RESTQ13127 1097 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 SEMA3BQ13214 749 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 ZNF423Q2M1K9 1284 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 DENND5BQ6ZUT9 1274 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 DPH6Q7L8W6 267 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 FILIP1Q7Z7B0 1213 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 C1orf127Q8N9H9 656 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 HMGB4Q8WW32 186 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 RLN3Q8WXF3 142 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 FIZ1Q96SL8 496 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 GTPBP2Q9BX10 602 aaKnown RBP18.1■□□□□ 0.49
VPS29-204ENST00000548259 ARHGEF4Q9NR80 690 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 RBAKQ9NYW8 714 aaPredicted RBP18.1■□□□□ 0.49
VPS29-204ENST00000548259 SEL1LQ9UBV2 794 aa18.1■□□□□ 0.49
VPS29-204ENST00000548259 SPAARA0A1B0GVQ0 90 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 TISP43B9A030 160 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 TRIM66O15016 1216 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 CYP17A1P05093 508 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 TMEM191BP0C7N4 346 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 LONP1P36776 959 aaKnown RBP18.09■□□□□ 0.49
VPS29-204ENST00000548259 PTGER3P43115 390 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 DHCR24Q15392 516 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 CRELD2Q6UXH1 353 aaPredicted RBP18.09■□□□□ 0.49
VPS29-204ENST00000548259 TMEM92Q6UXU6 159 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 ZNF720Q7Z2F6 126 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 PIP4P1Q86T03 277 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 BRSK2Q8IWQ3 736 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 ADGRG2Q8IZP9 1017 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 IL17RCQ8NAC3 791 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 KCNV2Q8TDN2 545 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 ACCSQ96QU6 501 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 FNBP1Q96RU3 617 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 PKMYT1Q99640 499 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 TBC1D14Q9P2M4 693 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 KLK13Q9UKR3 277 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 CDH9Q9ULB4 789 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 EML5Q05BV3 1969 aa18.09■□□□□ 0.49
VPS29-204ENST00000548259 TCRBV21S2A2A0A5A6 115 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 SGK1O00141 431 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 GABRDO14764 452 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 SYPP08247 313 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 SLC7A9P82251 487 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 BTBD8Q5XKL5 378 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 SYCP3Q8IZU3 236 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 LRRC15Q8TF66 581 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 ANKRD36BP1Q96IX9 119 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 SYT15Q9BQS2 421 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 MRPL44Q9H9J2 332 aaKnown RBP18.08■□□□□ 0.48
VPS29-204ENST00000548259 BLOC1S4Q9NUP1 217 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 TMEM74BQ9NUR3 256 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 PILRBQ9UKJ0 227 aa18.08■□□□□ 0.48
VPS29-204ENST00000548259 ZNF638Q14966 1978 aaKnown RBP18.08■□□□□ 0.48
VPS29-204ENST00000548259 ABCA7Q8IZY2 2146 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 ABL1P00519 1130 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 SERPINF2P08697 491 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 ADH5P11766 374 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 ADSSP30520 456 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 DDIT3P35638 169 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 CYP27A1Q02318 531 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 RPL6Q02878 288 aaKnown RBP18.07■□□□□ 0.48
VPS29-204ENST00000548259 MAP7D1Q3KQU3 841 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 PEAR1Q5VY43 1037 aaPredicted RBP18.07■□□□□ 0.48
VPS29-204ENST00000548259 TDRD10Q5VZ19 366 aaKnown RBP18.07■□□□□ 0.48
VPS29-204ENST00000548259 FAM171BQ6P995 826 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 SLITRK1Q96PX8 696 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 PCDHB13Q9Y5F0 798 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 CPQQ9Y646 472 aa18.07■□□□□ 0.48
VPS29-204ENST00000548259 SCN1AP35498 2009 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms