RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 OSCP1Q8WVF1 389 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 ATP2A3Q93084 1043 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 SLITRK1Q96PX8 696 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 CYP2S1Q96SQ9 504 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 P2RY13Q9BPV8 354 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 TTLL2Q9BWV7 592 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 DNAI2Q9GZS0 605 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 GZF1Q9H116 711 aaPredicted RBP9.97□□□□□ -0.81
YBX3-218ENST00000546298 HPS4Q9NQG7 708 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 RBM12Q9NTZ6 932 aaKnown RBP9.97□□□□□ -0.81
YBX3-218ENST00000546298 GCNT4Q9P109 453 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 GMEB2Q9UKD1 530 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 ARHGAP26Q9UNA1 814 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 SMG5Q9UPR3 1016 aaKnown RBP9.97□□□□□ -0.81
YBX3-218ENST00000546298 C2orf78A6NCI8 922 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 ZNF840PA6NDX5 716 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 GOLGA6L4A6NEF3 574 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 SLC9A3R1O14745 358 aaPredicted RBP9.96□□□□□ -0.82
YBX3-218ENST00000546298 ZNF202O95125 648 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 RTN3O95197 1032 aaPredicted RBP9.96□□□□□ -0.82
YBX3-218ENST00000546298 TDGF1P13385 188 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 KRT13P13646 458 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 DRD1P21728 446 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 YWHAQP27348 245 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 VAMP7P51809 220 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 SATB1Q01826 763 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 ENPEPQ07075 957 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 USP4Q13107 963 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 CCINQ13939 588 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 GAS6Q14393 721 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 ZNF77Q15935 545 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 NFIL3Q16649 462 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 ZACNQ401N2 412 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 FBXO43Q4G163 708 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 TRIM68Q6AZZ1 485 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 INTS8Q75QN2 995 aaKnown RBP9.96□□□□□ -0.82
YBX3-218ENST00000546298 SV2AQ7L0J3 742 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 LONP2Q86WA8 852 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 UNC93AQ86WB7 457 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 DDX42Q86XP3 938 aaKnown RBP eCLIP9.96□□□□□ -0.82
YBX3-218ENST00000546298 KIAA2013Q8IYS2 634 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 NUP93Q8N1F7 819 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 CCDC150Q8NCX0 1101 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 TTC16Q8NEE8 873 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 PDZD8Q8NEN9 1154 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 PLEKHO2Q8TD55 490 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 MED10Q9BTT4 135 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 B3GNT5Q9BYG0 378 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 IMPG2Q9BZV3 1241 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 ZNF518BQ9C0D4 1074 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 SMYD3Q9H7B4 428 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 ECT2Q9H8V3 914 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 COMMD8Q9NX08 183 aa9.96□□□□□ -0.82
YBX3-218ENST00000546298 PDCD11Q14690 1871 aaKnown RBP9.96□□□□□ -0.82
YBX3-218ENST00000546298 SCN1AP35498 2009 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 CHURC1-FNTBB4DL54 471 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 NFATC1O95644 943 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 ABL1P00519 1130 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 ARSAP15289 507 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 SDHBP21912 280 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 NR2F2P24468 414 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 GJA4P35212 333 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 PSMC2P35998 433 aaKnown RBP9.95□□□□□ -0.82
YBX3-218ENST00000546298 FNTBP49356 437 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 GALK1P51570 392 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 USP46P62068 366 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 SLC7A9P82251 487 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 DPYDQ12882 1025 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 TAF10Q12962 218 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 SIM2Q14190 667 aaPredicted RBP9.95□□□□□ -0.82
YBX3-218ENST00000546298 FSTL4Q6MZW2 842 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 Q6ZS52 159 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 ERMP1Q7Z2K6 904 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 GUF1Q8N442 669 aaKnown RBP9.95□□□□□ -0.82
YBX3-218ENST00000546298 DCLK2Q8N568 766 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 OVCA2Q8WZ82 227 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 SMARCD1Q96GM5 515 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 SLC22A12Q96S37 553 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 DPEP3Q9H4B8 488 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 DMAP1Q9NPF5 467 aaPredicted RBP9.95□□□□□ -0.82
YBX3-218ENST00000546298 SLC8A2Q9UPR5 921 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 WNT6Q9Y6F9 365 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 CACNA1IQ9P0X4 2223 aa9.95□□□□□ -0.82
YBX3-218ENST00000546298 CCDC163A0A0D9SF12 145 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 OTOL1A6NHN0 477 aaPredicted RBP9.94□□□□□ -0.82
YBX3-218ENST00000546298 PRR5-ARHGAP8B1AHC4 643 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 K7ESF4 209 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 LEFTY2O00292 366 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 CLDN5O00501 218 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 STX10O60499 249 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 VNN1O95497 513 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 ASS1P00966 412 aaKnown RBP9.94□□□□□ -0.82
YBX3-218ENST00000546298 PIK3CAP42336 1068 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 CDH8P55286 799 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 DLG4P78352 724 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 NUCB2P80303 420 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 ARHGAP8P85298 464 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 LMNB2Q03252 620 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 IFRD2Q12894 506 aaPredicted RBP9.94□□□□□ -0.82
YBX3-218ENST00000546298 ADAM9Q13443 819 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms