RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 KIZQ2M2Z5 673 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 ZCCHC9Q8N567 271 aaKnown RBP15.49■□□□□ 0.07
DDX55-209ENST00000542286 NETO2Q8NC67 525 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 WDR83Q9BRX9 315 aaKnown RBP15.49■□□□□ 0.07
DDX55-209ENST00000542286 FAM49AQ9H0Q0 323 aaPredicted RBP15.49■□□□□ 0.07
DDX55-209ENST00000542286 SAMD15Q9P1V8 674 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 SCN1AP35498 2009 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 EIF4BP23588 611 aaKnown RBP15.49■□□□□ 0.07
DDX55-209ENST00000542286 NDST1P52848 882 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 ILDR2Q71H61 639 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 CXorf38Q8TB03 319 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 LENG1Q96BZ8 264 aaPredicted RBP15.49■□□□□ 0.07
DDX55-209ENST00000542286 ROPN1BQ9BZX4 212 aaPredicted RBP15.49■□□□□ 0.07
DDX55-209ENST00000542286 ROPN1Q9HAT0 212 aaPredicted RBP15.49■□□□□ 0.07
DDX55-209ENST00000542286 GOLGA8RI6L899 631 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 LSM8O95777 96 aaKnown RBP15.48■□□□□ 0.07
DDX55-209ENST00000542286 NQO1P15559 274 aaKnown RBP15.48■□□□□ 0.07
DDX55-209ENST00000542286 TTLL4Q14679 1199 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 SYDE1Q6ZW31 735 aaPredicted RBP15.48■□□□□ 0.07
DDX55-209ENST00000542286 RFX6Q8HWS3 928 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 HPDLQ96IR7 371 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 APOL6Q9BWW8 343 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 C2orf40Q9H1Z8 148 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 SLC5A4Q9NY91 659 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 ERAP1Q9NZ08 941 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 GRID1Q9ULK0 1009 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 NR2E3Q9Y5X4 410 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 E5RJQ4 531 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 HBP1O60381 514 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 ADORA2AP29274 412 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 CTCFP49711 727 aaPredicted RBP15.48■□□□□ 0.07
DDX55-209ENST00000542286 WDR4P57081 412 aaKnown RBP15.48■□□□□ 0.07
DDX55-209ENST00000542286 TFDP1Q14186 410 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 PIGHQ14442 188 aaPredicted RBP15.48■□□□□ 0.07
DDX55-209ENST00000542286 RNASEH2BQ5TBB1 312 aaKnown RBP15.48■□□□□ 0.07
DDX55-209ENST00000542286 FAXCQ5TGI0 409 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 CGB2Q6NT52 195 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 KCTD6Q8NC69 237 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
DDX55-209ENST00000542286 PRCCQ92733 491 aaPredicted RBP15.48■□□□□ 0.07
DDX55-209ENST00000542286 B3GNT5Q9BYG0 378 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 CDHR5Q9HBB8 845 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 HOMER3Q9NSC5 361 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 PNMA3Q9UL41 463 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 PCDHGC3Q9UN70 934 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 TNFSF13BQ9Y275 285 aa15.48■□□□□ 0.07
DDX55-209ENST00000542286 SIGLEC16A6NMB1 481 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 F5H423 210 aaPredicted RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 AVILO75366 819 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 TMEM63AO94886 807 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 ALADP13716 330 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 TFE3P19532 575 aaPredicted RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 KDELR1P24390 212 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 STX2P32856 288 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 CETN2P41208 172 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 YWHAEP62258 255 aaKnown RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 CCDC142Q17RM4 750 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 C9orf131Q5VYM1 1079 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 TAPT1Q6NXT6 567 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 SCYL2Q6P3W7 929 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 C1orf228Q6PIY5 440 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 MAMDC4Q6UXC1 1216 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 TMEM176AQ96HP8 235 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 CFAP57Q96MR6 1250 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 TGS1Q96RS0 853 aaKnown RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 SLCO1B3Q9NPD5 702 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 CORO1CQ9ULV4 474 aaPredicted RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 TRIM33Q9UPN9 1127 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 NME7Q9Y5B8 376 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 ADCY6O43306 1168 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 CILPO75339 1184 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 SLC25A27O95847 323 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 YBX3P16989 372 aaKnown RBP eCLIP15.47■□□□□ 0.07
DDX55-209ENST00000542286 AP3M2P53677 418 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 ATXN1P54253 815 aaKnown RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 GPX6P59796 221 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 OR6B2Q6IFH4 312 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 RMDN2Q96LZ7 410 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 BCO2Q9BYV7 579 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 YIPF3Q9GZM5 350 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 WDR91A4D1P6 747 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 UBOX5O94941 541 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 KRT15P19012 456 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 CCND1P24385 295 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 CDH5P33151 784 aaPredicted RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 RPL22P35268 128 aaKnown RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 GPD2P43304 727 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 BASP1P80723 227 aaKnown RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 ZC3H12AQ5D1E8 599 aaKnown RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 SLC35B2Q8TB61 432 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 CPT1BQ92523 772 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 KCNN1Q92952 543 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 C18orf25Q96B23 403 aaPredicted RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 ADPGKQ9BRR6 497 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 TRIM56Q9BRZ2 755 aaKnown RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 ALG13Q9NP73 1137 aaKnown RBP15.47■□□□□ 0.07
DDX55-209ENST00000542286 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.47■□□□□ 0.07
DDX55-209ENST00000542286 GJD2Q9UKL4 321 aa15.47■□□□□ 0.07
DDX55-209ENST00000542286 CLUHO75153 1309 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 ANKRD33BA6NCL7 494 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms