RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 PTPRDP23468 1912 aa18.92■□□□□ 0.62
AP003555.3-201ENST00000534086 KIF26AQ9ULI4 1882 aaPredicted RBP18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 C2orf78A6NCI8 922 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 CLDN5O00501 218 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 P4HA1P13674 534 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 HDCP19113 662 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 NR2F2P24468 414 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 RAP1GAPP47736 663 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 CXCL12P48061 93 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 NRLP54845 237 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 USP46P62068 366 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 NOP14P78316 857 aaKnown RBP18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 GAS6Q14393 721 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 NFIL3Q16649 462 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 SCARA5Q6ZMJ2 495 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 SV2AQ7L0J3 742 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 GUF1Q8N442 669 aaKnown RBP18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 SPEM1Q8N4L4 309 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 RIN3Q8TB24 985 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 TTLL2Q9BWV7 592 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 ZNF518BQ9C0D4 1074 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 GCNT4Q9P109 453 aa18.91■□□□□ 0.62
AP003555.3-201ENST00000534086 ANAPC1Q9H1A4 1944 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 MAPK13O15264 365 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 ARSAP15289 507 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 RPL13P26373 211 aaKnown RBP18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 PDE6CP51160 858 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 VAMP7P51809 220 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 CACNA2D1P54289 1103 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 MTF1Q14872 753 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 PDGFRLQ15198 375 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 WDR44Q5JSH3 913 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 SUMF1Q8NBK3 374 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 TAF4BQ92750 862 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 TNIP3Q96KP6 325 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 HINFPQ9BQA5 517 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 SDCBP2Q9H190 292 aa18.9■□□□□ 0.62
AP003555.3-201ENST00000534086 GOLGA6L4A6NEF3 574 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 OTOL1A6NHN0 477 aaPredicted RBP18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 KRT13P13646 458 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 PFKLP17858 780 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 PPP3CCP48454 512 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 NUCB2P80303 420 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 AMPD2Q01433 879 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 SATB1Q01826 763 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 CCINQ13939 588 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 ZNF77Q15935 545 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 C1orf220Q5T0J3 134 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 INTS8Q75QN2 995 aaKnown RBP18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 SYNPOQ8N3V7 929 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 SH3RF2Q8TEC5 729 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 RUBCNQ92622 972 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 MED10Q9BTT4 135 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 TMEM30AQ9NV96 361 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 DUS2Q9NX74 493 aaKnown RBP18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 ATP8B3O60423 1300 aa18.89■□□□□ 0.61
AP003555.3-201ENST00000534086 ZNF840PA6NDX5 716 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 LILRB5O75023 590 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 AKAP3O75969 853 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 ABL1P00519 1130 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 HLA-DRAP01903 254 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 TDGF1P13385 188 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 PSMC2P35998 433 aaKnown RBP18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 PIK3CAP42336 1068 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 IFNAR2P48551 515 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 IFRD2Q12894 506 aaPredicted RBP18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 TAF10Q12962 218 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 USP4Q13107 963 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 ADAM9Q13443 819 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 Q6ZS52 159 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 ACOT1Q86TX2 421 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 FAM186BQ8IYM0 893 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 NUP93Q8N1F7 819 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 CPA6Q8N4T0 437 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 OSCP1Q8WVF1 389 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 SLITRK1Q96PX8 696 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 ARHGAP26Q9UNA1 814 aa18.88■□□□□ 0.61
AP003555.3-201ENST00000534086 TRDMT1O14717 391 aaKnown RBP18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 ASS1P00966 412 aaKnown RBP18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 TCF3P15923 654 aa18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 GRSF1Q12849 480 aaKnown RBP eCLIP18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 PNOCQ13519 176 aa18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 TMEM196Q5HYL7 178 aa18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 SPOPLQ6IQ16 392 aa18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 FAM35AQ86V20 835 aa18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 FMR1NBQ8N0W7 255 aaPredicted RBP18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 ATP2A3Q93084 1043 aa18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 KCNK16Q96T55 309 aa18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 IMPG2Q9BZV3 1241 aa18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 ECT2Q9H8V3 914 aa18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 WNT6Q9Y6F9 365 aa18.87■□□□□ 0.61
AP003555.3-201ENST00000534086 EP300Q09472 2414 aaPredicted RBP18.86■□□□□ 0.61
AP003555.3-201ENST00000534086 RTN3O95197 1032 aaPredicted RBP18.86■□□□□ 0.61
AP003555.3-201ENST00000534086 TRIM49P0CI25 452 aa18.86■□□□□ 0.61
AP003555.3-201ENST00000534086 TRIM49CP0CI26 452 aa18.86■□□□□ 0.61
AP003555.3-201ENST00000534086 YWHAQP27348 245 aa18.86■□□□□ 0.61
AP003555.3-201ENST00000534086 GCLMP48507 274 aa18.86■□□□□ 0.61
AP003555.3-201ENST00000534086 NDST1P52848 882 aa18.86■□□□□ 0.61
AP003555.3-201ENST00000534086 ENPEPQ07075 957 aa18.86■□□□□ 0.61
AP003555.3-201ENST00000534086 PAQR9Q6ZVX9 377 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms