RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 ANAPC1Q9H1A4 1944 aa22.55■■□□□ 1.2
CHKA-206ENST00000531341 BAHCC1Q9P281 2608 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 MYMKA6NI61 221 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 CD2BP2O95400 341 aaKnown RBP22.54■■□□□ 1.2
CHKA-206ENST00000531341 NFATC1O95644 943 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 BDNFP23560 247 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 SF3A1Q15459 793 aaKnown RBP22.54■■□□□ 1.2
CHKA-206ENST00000531341 L1TD1Q5T7N2 865 aaKnown RBP22.54■■□□□ 1.2
CHKA-206ENST00000531341 ARMCX6Q7L4S7 300 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 FILIP1Q7Z7B0 1213 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 ADGRG2Q8IZP9 1017 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 TOP6BLQ8N6T0 577 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 CACTINQ8WUQ7 758 aaKnown RBP22.54■■□□□ 1.2
CHKA-206ENST00000531341 DNAJC19Q96DA6 116 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 FUBP3Q96I24 572 aaKnown RBP eCLIP22.54■■□□□ 1.2
CHKA-206ENST00000531341 TMX3Q96JJ7 454 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 CBWD1Q9BRT8 395 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 MTMR12Q9C0I1 747 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 PCIF1Q9H4Z3 704 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 MRPL44Q9H9J2 332 aaKnown RBP22.54■■□□□ 1.2
CHKA-206ENST00000531341 CRTAC1Q9NQ79 661 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 MBD1Q9UIS9 605 aaPredicted RBP22.54■■□□□ 1.2
CHKA-206ENST00000531341 ITGA11Q9UKX5 1188 aa22.54■■□□□ 1.2
CHKA-206ENST00000531341 FAM208BQ5VWN6 2430 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 ZFYVE26Q68DK2 2539 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 THADAQ6YHU6 1953 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 SGK1O00141 431 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 CYP17A1P05093 508 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 PTGER3P43115 390 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 MAGEA11P43364 429 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 LHX1P48742 406 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 KIAA1211LQ6NV74 962 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 LIMS2Q7Z4I7 341 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 C11orf74Q86VG3 221 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 C12orf40Q86WS4 652 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 TMEFF1Q8IYR6 380 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 ALLCQ8N6M5 410 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 MYLPFQ96A32 169 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 ACCSQ96QU6 501 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 PTPRJQ12913 1337 aa22.53■■□□□ 1.2
CHKA-206ENST00000531341 TIE1P35590 1138 aa22.52■■□□□ 1.2
CHKA-206ENST00000531341 P2RY2P41231 377 aa22.52■■□□□ 1.2
CHKA-206ENST00000531341 RBP5P82980 135 aa22.52■■□□□ 1.2
CHKA-206ENST00000531341 IL17RCQ8NAC3 791 aa22.52■■□□□ 1.2
CHKA-206ENST00000531341 TXNDC5Q8NBS9 432 aaKnown RBP22.52■■□□□ 1.2
CHKA-206ENST00000531341 OR5B17Q8NGF7 314 aa22.52■■□□□ 1.2
CHKA-206ENST00000531341 NOC3LQ8WTT2 800 aaKnown RBP22.52■■□□□ 1.2
CHKA-206ENST00000531341 SPATA17Q96L03 361 aa22.52■■□□□ 1.2
CHKA-206ENST00000531341 SYT15Q9BQS2 421 aa22.52■■□□□ 1.2
CHKA-206ENST00000531341 FSCN3Q9NQT6 498 aa22.52■■□□□ 1.2
CHKA-206ENST00000531341 MAGEC2Q9UBF1 373 aaPredicted RBP22.52■■□□□ 1.2
CHKA-206ENST00000531341 CIZ1Q9ULV3 898 aaPredicted RBP22.52■■□□□ 1.2
CHKA-206ENST00000531341 NME7Q9Y5B8 376 aa22.52■■□□□ 1.2
CHKA-206ENST00000531341 SRRM3A6NNA2 597 aaPredicted RBP22.51■■□□□ 1.19
CHKA-206ENST00000531341 GCNT3O95395 438 aa22.51■■□□□ 1.19
CHKA-206ENST00000531341 KLF8O95600 359 aaPredicted RBP22.51■■□□□ 1.19
CHKA-206ENST00000531341 PDGFRBP09619 1106 aa22.51■■□□□ 1.19
CHKA-206ENST00000531341 PCSK1P29120 753 aa22.51■■□□□ 1.19
CHKA-206ENST00000531341 GRIK1P39086 918 aa22.51■■□□□ 1.19
CHKA-206ENST00000531341 MAPK8P45983 427 aa22.51■■□□□ 1.19
CHKA-206ENST00000531341 DHCR24Q15392 516 aa22.51■■□□□ 1.19
CHKA-206ENST00000531341 TRIM61Q5EBN2 209 aa22.51■■□□□ 1.19
CHKA-206ENST00000531341 CCDC26Q8TAB7 109 aa22.51■■□□□ 1.19
CHKA-206ENST00000531341 SMPD4Q9NXE4 827 aa22.51■■□□□ 1.19
CHKA-206ENST00000531341 EVLQ9UI08 416 aaPredicted RBP22.51■■□□□ 1.19
CHKA-206ENST00000531341 CPQQ9Y646 472 aa22.51■■□□□ 1.19
CHKA-206ENST00000531341 PTPRDP23468 1912 aa22.51■■□□□ 1.19
CHKA-206ENST00000531341 ATRXP46100 2492 aa22.5■■□□□ 1.19
CHKA-206ENST00000531341 ZNF840PA6NDX5 716 aa22.5■■□□□ 1.19
CHKA-206ENST00000531341 HYAL3O43820 417 aaPredicted RBP22.5■■□□□ 1.19
CHKA-206ENST00000531341 NEFLP07196 543 aa22.5■■□□□ 1.19
CHKA-206ENST00000531341 GARTP22102 1010 aa22.5■■□□□ 1.19
CHKA-206ENST00000531341 MRPS21P82921 87 aaKnown RBP22.5■■□□□ 1.19
CHKA-206ENST00000531341 RHBDF2Q6PJF5 856 aa22.5■■□□□ 1.19
CHKA-206ENST00000531341 C4orf50Q6ZRC1 276 aa22.5■■□□□ 1.19
CHKA-206ENST00000531341 DENND5BQ6ZUT9 1274 aa22.5■■□□□ 1.19
CHKA-206ENST00000531341 SPATA18Q8TC71 538 aa22.5■■□□□ 1.19
CHKA-206ENST00000531341 TRPM5Q9NZQ8 1165 aa22.5■■□□□ 1.19
CHKA-206ENST00000531341 CDH9Q9ULB4 789 aa22.5■■□□□ 1.19
CHKA-206ENST00000531341 EXOC7Q9UPT5 735 aa22.5■■□□□ 1.19
CHKA-206ENST00000531341 ATXN2Q99700 1313 aaKnown RBP22.5■■□□□ 1.19
CHKA-206ENST00000531341 ADAM23O75077 832 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 LDHAP00338 332 aaKnown RBP22.49■■□□□ 1.19
CHKA-206ENST00000531341 ENGP17813 658 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 KIR2DL1P43626 348 aaPredicted RBP22.49■■□□□ 1.19
CHKA-206ENST00000531341 CACNA2D1P54289 1103 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 SLC7A9P82251 487 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 CYP27A1Q02318 531 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 MAP7D1Q3KQU3 841 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 VSTM1Q6UX27 236 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 LPCAT2Q7L5N7 544 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 PCED1BQ96HM7 432 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 HPDLQ96IR7 371 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 PNKPQ96T60 521 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 TTLL2Q9BWV7 592 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 TMEM30AQ9NV96 361 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 SEL1LQ9UBV2 794 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 CLIC4Q9Y696 253 aa22.49■■□□□ 1.19
CHKA-206ENST00000531341 LOC400499M0QZD8 3231 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms