RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 TRAIPQ9BWF2 469 aa27.17■■□□□ 1.94
COL13A1-214ENST00000522165 ZMYND15Q9H091 742 aa27.17■■□□□ 1.94
COL13A1-214ENST00000522165 SNX25Q9H3E2 840 aa27.17■■□□□ 1.94
COL13A1-214ENST00000522165 CENPHQ9H3R5 247 aa27.17■■□□□ 1.94
COL13A1-214ENST00000522165 AAASQ9NRG9 546 aa27.17■■□□□ 1.94
COL13A1-214ENST00000522165 TMEM88BA6NKF7 163 aa27.16■■□□□ 1.94
COL13A1-214ENST00000522165 GABBR2O75899 941 aa27.16■■□□□ 1.94
COL13A1-214ENST00000522165 VPS41P49754 854 aa27.16■■□□□ 1.94
COL13A1-214ENST00000522165 LILRA4P59901 499 aa27.16■■□□□ 1.94
COL13A1-214ENST00000522165 IFFO1Q0D2I5 559 aa27.16■■□□□ 1.94
COL13A1-214ENST00000522165 KDM7AQ6ZMT4 941 aa27.16■■□□□ 1.94
COL13A1-214ENST00000522165 PKNOX2Q96KN3 472 aa27.16■■□□□ 1.94
COL13A1-214ENST00000522165 ZFP42Q96MM3 310 aa27.16■■□□□ 1.94
COL13A1-214ENST00000522165 CTSHP09668 335 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 VCPP55072 806 aaKnown RBP27.15■■□□□ 1.94
COL13A1-214ENST00000522165 SLC6A3Q01959 620 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 OASLQ15646 514 aaKnown RBP27.15■■□□□ 1.94
COL13A1-214ENST00000522165 AGBL2Q5U5Z8 902 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 NKD2Q969F2 451 aaPredicted RBP27.15■■□□□ 1.94
COL13A1-214ENST00000522165 LRRC4CQ9HCJ2 640 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 XPNPEP3Q9NQH7 507 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 ANAPC5Q9UJX4 755 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 ZNF148Q9UQR1 794 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 HUS1O60921 280 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 GRAP2O75791 330 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 SHBGP04278 402 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 CCDC130P13994 396 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 NR1D1P20393 614 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 SNX16P57768 344 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 CAP1Q01518 475 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 SLC29A2Q14542 456 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 KRT71Q3SY84 523 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 SH3PXD2AQ5TCZ1 1133 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 RPAINQ86UA6 219 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 CCDC25Q86WR0 208 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 ALLCQ8N6M5 410 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 ANKRD52Q8NB46 1076 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 BBOF1Q8ND07 529 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 HAUS1Q96CS2 278 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 PEBP4Q96S96 227 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 CHST12Q9NRB3 414 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 FAM105AQ9NUU6 356 aa27.15■■□□□ 1.94
COL13A1-214ENST00000522165 DCAF8L1A6NGE4 600 aa27.14■■□□□ 1.94
COL13A1-214ENST00000522165 DPYSL4O14531 572 aa27.14■■□□□ 1.94
COL13A1-214ENST00000522165 PAPSS1O43252 624 aaPredicted RBP27.14■■□□□ 1.94
COL13A1-214ENST00000522165 ACTN2P35609 894 aa27.14■■□□□ 1.94
COL13A1-214ENST00000522165 MGAT3Q09327 533 aa27.14■■□□□ 1.94
COL13A1-214ENST00000522165 TAF5Q15542 800 aa27.14■■□□□ 1.94
COL13A1-214ENST00000522165 BBS12Q6ZW61 710 aa27.14■■□□□ 1.94
COL13A1-214ENST00000522165 ADGRF2Q8IZF7 708 aa27.14■■□□□ 1.94
COL13A1-214ENST00000522165 KCTD6Q8NC69 237 aa27.14■■□□□ 1.94
COL13A1-214ENST00000522165 KHSRPQ92945 711 aaKnown RBP eCLIP27.14■■□□□ 1.94
COL13A1-214ENST00000522165 CAPS2Q9BXY5 557 aa27.14■■□□□ 1.94
COL13A1-214ENST00000522165 TSPYL1Q9H0U9 437 aa27.14■■□□□ 1.94
COL13A1-214ENST00000522165 MEIS3P2A8K0S8 358 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 RIPK2O43353 540 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 ASGR1P07306 291 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 CD48P09326 243 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 CHKAP35790 457 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 BST2Q10589 180 aaKnown RBP27.13■■□□□ 1.93
COL13A1-214ENST00000522165 C15orf59Q2T9L4 293 aaPredicted RBP27.13■■□□□ 1.93
COL13A1-214ENST00000522165 UBAP2Q5T6F2 1119 aaKnown RBP27.13■■□□□ 1.93
COL13A1-214ENST00000522165 PRUNE1Q86TP1 453 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 ZDHHC17Q8IUH5 632 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 SCUBE3Q8IX30 993 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 TOP6BLQ8N6T0 577 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 SLC35B2Q8TB61 432 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 CCHCR1Q8TD31 782 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 CST8O60676 142 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 WARSP23381 471 aaKnown RBP27.13■■□□□ 1.93
COL13A1-214ENST00000522165 ADORA2BP29275 332 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 CCND3P30281 292 aaPredicted RBP27.13■■□□□ 1.93
COL13A1-214ENST00000522165 BCAT1P54687 386 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 CCDC14Q49A88 953 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 CYP4V2Q6ZWL3 525 aaPredicted RBP27.13■■□□□ 1.93
COL13A1-214ENST00000522165 TRMT10CQ7L0Y3 403 aaKnown RBP27.13■■□□□ 1.93
COL13A1-214ENST00000522165 HSPH1Q92598 858 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 DNAI2Q9GZS0 605 aa27.13■■□□□ 1.93
COL13A1-214ENST00000522165 RPLP2P05387 115 aaKnown RBP27.12■■□□□ 1.93
COL13A1-214ENST00000522165 ITGAVP06756 1048 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 KCNA10Q16322 511 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 RAB6CQ53S08 254 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 IZUMO3Q5VZ72 239 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 OSTM1Q86WC4 334 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 GSTCDQ8NEC7 633 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 KLHDC9Q8NEP7 349 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 FRMD8P1Q9BZ68 369 aaPredicted RBP27.12■■□□□ 1.93
COL13A1-214ENST00000522165 RAB6CQ9H0N0 254 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 CASP8AP2Q9UKL3 1982 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 RPL34P49207 117 aaKnown RBP27.12■■□□□ 1.93
COL13A1-214ENST00000522165 DYNLT1P63172 113 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 LEKR1Q6ZMV7 388 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 HOOK3Q86VS8 718 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 GLIS1Q8NBF1 620 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 TTC13Q8NBP0 860 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 CFAP57Q96MR6 1250 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 B3GNT5Q9BYG0 378 aa27.12■■□□□ 1.93
COL13A1-214ENST00000522165 ATP1A2P50993 1020 aa27.11■■□□□ 1.93
COL13A1-214ENST00000522165 HACE1Q8IYU2 909 aa27.11■■□□□ 1.93
COL13A1-214ENST00000522165 SMC1BQ8NDV3 1235 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms