RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SNAPC2Q13487 334 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 PRPF4BQ13523 1007 aaKnown RBP5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 NEDD9Q14511 834 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 PDIA5Q14554 519 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 CRYMQ14894 314 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 SLC5A9Q2M3M2 681 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 MFSD4BQ5TF39 518 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 LAIR1Q6GTX8 287 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 CATIPQ7Z7H3 387 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 SRLQ86TD4 932 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 ERC1Q8IUD2 1116 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 C10orf67Q8IYJ2 551 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 DCBLD1Q8N8Z6 715 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 IQUBQ8NA54 791 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 GOLGA5Q8TBA6 731 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 TCP11Q8WWU5 503 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 PIBF1Q8WXW3 757 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 RAB24Q969Q5 203 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 MARS2Q96GW9 593 aaKnown RBP5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 CNPPD1Q9BV87 410 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 RHOBTB2Q9BYZ6 727 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 RWDD1Q9H446 243 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 SERHL2Q9H4I8 314 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 TRPV5Q9NQA5 729 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 GABBR1Q9UBS5 961 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 POLKQ9UBT6 870 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 PNMA2Q9UL42 364 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 BLOC1S6Q9UL45 172 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 STXBP5LQ9Y2K9 1186 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 PCDHA3Q9Y5H8 950 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 TNRQ92752 1358 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 BCORL1Q5H9F3 1711 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 SPATA31E1Q6ZUB1 1445 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 TRGV11A0A075B6L2 103 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 CENPVL1A0A0U1RR11 272 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 CCDC195A0A1B0GUA6 201 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 A0A1B0GUA9 196 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 MARCH11A6NNE9 402 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 H3BML4 177 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 KIF2AO00139 706 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 F2RL2O00254 374 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 AP1G1O43747 822 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 CCDC159P0C7I6 412 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 RARBP10826 455 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 TYRP14679 529 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 KCNA2P16389 499 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 FDXRP22570 491 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 PRDX5P30044 214 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 NF2P35240 595 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 MNAT1P51948 309 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 EIF5P55010 431 aaKnown RBP5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 NOMO3P69849 1222 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 FAM189BP81408 668 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 FPGSQ05932 587 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 HABP2Q14520 560 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 NBPF8Q3BBV2 869 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 NOMO2Q5JPE7 1267 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 SP5Q6BEB4 398 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 C16orf87Q6PH81 154 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 CCDC80Q76M96 950 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 CENPQQ7L2Z9 268 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 SDCCAG8Q86SQ7 713 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 DAAM2Q86T65 1068 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 ZNF575Q86XF7 245 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 DENND1CQ8IV53 801 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 ANKRD18AQ8IVF6 992 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 WDR75Q8IWA0 830 aaKnown RBP5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 MYOCDQ8IZQ8 938 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 PDILTQ8N807 584 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 CCDC191Q8NCU4 936 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 SLC17A8Q8NDX2 589 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 ZNF397Q8NF99 534 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 HDAC7Q8WUI4 952 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 MOGAT1Q96PD6 335 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 IMPG2Q9BZV3 1241 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 UNC45AQ9H3U1 944 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 PANK3Q9H999 370 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 ITGB1BP2Q9UKP3 347 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 PACSIN3Q9UKS6 424 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 CDYLQ9Y232 598 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 RRP15Q9Y3B9 282 aaKnown RBP5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 NLRP1Q9C000 1473 aa5.17□□□□□ -1.58
HMGB3P13-201ENST00000511263 PRAMEF33A0A0G2JMD5 474 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 A0A1W2PS29 197 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 GOLGA6L10A6NI86 522 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 GOLGA6L19H0YKK7 550 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 CREB3O43889 395 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 PRAMEF10O60809 474 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 NEBLO76041 1014 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 TPPPO94811 219 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 GCP02774 474 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 GJB1P08034 283 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 ITGAMP11215 1152 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 GCFC2P16383 781 aaKnown RBP5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 NR4A1P22736 598 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 YY1P25490 414 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 MAP2K6P52564 334 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 VAV2P52735 878 aa5.16□□□□□ -1.58
HMGB3P13-201ENST00000511263 KIF22Q14807 665 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms