RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 PPP2R3CQ969Q6 453 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 LENG8Q96PV6 779 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 FSD1LQ9BXM9 530 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 C1orf112Q9NSG2 853 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 SACM1LQ9NTJ5 587 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 CCNL1Q9UK58 526 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 SH2B3Q9UQQ2 575 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 COL3A1P02461 1466 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 ONECUT2O95948 504 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 CELA2AP08217 269 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 BRAFP15056 766 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 ITGA8P53708 1063 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 TPTEP56180 551 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 RAB32Q13637 225 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 GALEQ14376 348 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 PRAMEF17Q5VTA0 474 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 PARS2Q7L3T8 475 aaKnown RBP4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 WDR53Q7Z5U6 358 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 CAND1Q86VP6 1230 aaKnown RBP4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 IZUMO1Q8IYV9 350 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 SEMA6DQ8NFY4 1073 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 CYP2W1Q8TAV3 490 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 DNAJB14Q8TBM8 379 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 SH2D3AQ9BRG2 576 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 C17orf80Q9BSJ5 609 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 ZNF518BQ9C0D4 1074 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 BHMT2Q9H2M3 363 aa4.22□□□□□ -1.73
HMGB1P29-201ENST00000505659 WDR91A4D1P6 747 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 TRIM43BA6NCK2 446 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 H7C4K7 107 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 AP4M1O00189 453 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 TPP1O14773 563 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 SRGAP2O75044 1071 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 JTBO76095 146 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 NPSP0C0P6 89 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 XRCC6P12956 609 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 MPGP29372 298 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 RPS16P62249 146 aaKnown RBP4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 E2F1Q01094 437 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 SATB1Q01826 763 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 GRM1Q13255 1194 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 L1TD1Q5T7N2 865 aaKnown RBP4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 FCRL6Q6DN72 434 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 CCDC149Q6ZUS6 474 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 ZNF804AQ7Z570 1209 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 C14orf80Q86SX3 495 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 MYO1HQ8N1T3 1032 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 VGLL2Q8N8G2 317 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 TRIM43Q96BQ3 446 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 PRR25Q96S07 402 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 STK31Q9BXU1 1019 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 KLHL42Q9P2K6 505 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 RNF7Q9UBF6 113 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 LPAR3Q9UBY5 353 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 TCEAL9Q9UHQ7 104 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 TPCN1Q9ULQ1 816 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 GABRQQ9UN88 632 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 CDY1Q9Y6F8 540 aa4.21□□□□□ -1.74
HMGB1P29-201ENST00000505659 PYCARD-AS1I3L0S3 204 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 EXOC3O60645 756 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 LATS1O95835 1130 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 U2AF1L5P0DN76 240 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 IL1R1P14778 569 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 ZKSCAN1P17029 563 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 PSG6Q00889 435 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 U2AF1Q01081 240 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 KRTAP1-1Q07627 177 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 SLC10A2Q12908 348 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 HNRNPA0Q13151 305 aaKnown RBP4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 CNGA2Q16280 664 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 CACHD1Q5VU97 1274 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 KIRREL2Q6UWL6 708 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 SESTD1Q86VW0 696 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 CHSY1Q86X52 802 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 RP9Q8TA86 221 aaKnown RBP4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 LRTOMTQ8WZ04 291 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 SPSB4Q96A44 273 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 ZNF778Q96MU6 729 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 THAP7Q9BT49 309 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 FAM204AQ9H8W3 233 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 A1CFQ9NQ94 594 aaKnown RBP4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 TRMT13Q9NUP7 481 aaKnown RBP4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 COL20A1Q9P218 1284 aa4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 DNMT3BQ9UBC3 853 aaKnown RBP4.2□□□□□ -1.74
HMGB1P29-201ENST00000505659 INO80B-WBP1J3KQ70 363 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 FRS3O43559 492 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 RASSF9O75901 435 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 TJP3O95049 919 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 RASAL1O95294 804 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 CYP2D6P10635 497 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 CDK4P11802 303 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 HGFP14210 728 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 EPHB2P29323 1055 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 FMO1Q01740 532 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 SRSF7Q16629 238 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 KIAA0753Q2KHM9 967 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 SUPT20HL1Q3ZLR7 823 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 RNASE12Q5GAN4 147 aaKnown RBP4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 CEP78Q5JTW2 689 aa4.19□□□□□ -1.74
HMGB1P29-201ENST00000505659 CERCAMQ5T4B2 595 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms