RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 OBSL1O75147 1896 aa21.3■■□□□ 1
UBE2D3-220ENST00000505307 PHACTR2O75167 634 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 MYL1P05976 194 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 PTPN1P18031 435 aaKnown RBP21.29■■□□□ 1
UBE2D3-220ENST00000505307 TGM1P22735 817 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 DNM1Q05193 864 aaKnown RBP21.29■■□□□ 1
UBE2D3-220ENST00000505307 MDH1BQ5I0G3 518 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 ARL14EPQ8N8R7 260 aaPredicted RBP21.29■■□□□ 1
UBE2D3-220ENST00000505307 CCDC26Q8TAB7 109 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 RIN3Q8TB24 985 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 SH3RF2Q8TEC5 729 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 ZNF516Q92618 1163 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 SLC22A12Q96S37 553 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 P2RY13Q9BPV8 354 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 VRTNQ9H8Y1 702 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 EXOC1Q9NV70 894 aa21.29■■□□□ 1
UBE2D3-220ENST00000505307 C2orf78A6NCI8 922 aa21.28■■□□□ 1
UBE2D3-220ENST00000505307 FOXD2O60548 495 aaPredicted RBP21.28■■□□□ 1
UBE2D3-220ENST00000505307 GJA4P35212 333 aa21.28■■□□□ 1
UBE2D3-220ENST00000505307 MYL6P60660 151 aa21.28■■□□□ 1
UBE2D3-220ENST00000505307 CLDN10P78369 228 aa21.28■■□□□ 1
UBE2D3-220ENST00000505307 DMWDQ09019 674 aa21.28■■□□□ 1
UBE2D3-220ENST00000505307 HEATR6Q6AI08 1181 aaKnown RBP21.28■■□□□ 1
UBE2D3-220ENST00000505307 SLC9A9Q8IVB4 645 aa21.28■■□□□ 1
UBE2D3-220ENST00000505307 CHFRQ96EP1 664 aa21.28■■□□□ 1
UBE2D3-220ENST00000505307 GZF1Q9H116 711 aaPredicted RBP21.28■■□□□ 1
UBE2D3-220ENST00000505307 XYLT2Q9H1B5 865 aa21.28■■□□□ 1
UBE2D3-220ENST00000505307 SERTAD1Q9UHV2 236 aa21.28■■□□□ 1
UBE2D3-220ENST00000505307 SLC8A2Q9UPR5 921 aa21.28■■□□□ 1
UBE2D3-220ENST00000505307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.27■■□□□ 1
UBE2D3-220ENST00000505307 A8MXQ7 604 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 F8VP50 259 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 ACTN4O43707 911 aaKnown RBP21.27■■□□□ 1
UBE2D3-220ENST00000505307 GALK1P51570 392 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 LPAL2Q16609 132 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 EML3Q32P44 896 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 TDRD10Q5VZ19 366 aaKnown RBP21.27■■□□□ 1
UBE2D3-220ENST00000505307 CEP68Q76N32 757 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.27■■□□□ 1
UBE2D3-220ENST00000505307 CAMKK1Q8N5S9 505 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 B3GALNT2Q8NCR0 500 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 PARD3BQ8TEW8 1205 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 PAGE5Q96GU1 130 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 C2orf42Q9NWW7 574 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 NXF1Q9UBU9 619 aaKnown RBP21.27■■□□□ 1
UBE2D3-220ENST00000505307 CDV3Q9UKY7 258 aaKnown RBP21.27■■□□□ 1
UBE2D3-220ENST00000505307 DNAH14Q0VDD8 3507 aa21.27■■□□□ 1
UBE2D3-220ENST00000505307 ATP8B3O60423 1300 aa21.27■□□□□ 0.99
UBE2D3-220ENST00000505307 ZNF840PA6NDX5 716 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 KLRC4O43908 158 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 NFATC1O95644 943 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 CMA1P23946 247 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 SLC7A9P82251 487 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 STK4Q13043 487 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 BIRC3Q13489 604 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 PKP1Q13835 747 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 CD101Q93033 1021 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 TNIP3Q96KP6 325 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 SLITRK1Q96PX8 696 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 DMAC2Q9NW81 257 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 WNT6Q9Y6F9 365 aa21.26■□□□□ 0.99
UBE2D3-220ENST00000505307 PDXKO00764 312 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 RNF40O75150 1001 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 KIF20AO95235 890 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 EGFP01133 1207 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 USP46P62068 366 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 SPEM2Q0P670 501 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 ZNF699Q32M78 642 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 ZNF667Q5HYK9 610 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 GRAMD1CQ8IYS0 662 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 TTC16Q8NEE8 873 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 RTKNQ9BST9 563 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 PARD6AQ9NPB6 346 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 NME7Q9Y5B8 376 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 GREB1Q4ZG55 1949 aa21.25■□□□□ 0.99
UBE2D3-220ENST00000505307 ANAPC1Q9H1A4 1944 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 SLC9A3R1O14745 358 aaPredicted RBP21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 AKAP3O75969 853 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 RTN3O95197 1032 aaPredicted RBP21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 C4BPAP04003 597 aaKnown RBP21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 RPN1P04843 607 aaKnown RBP21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 P4HA1P13674 534 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 NCOA4Q13772 614 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 CSRP2Q16527 193 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 KMT5BQ4FZB7 885 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 PKN3Q6P5Z2 889 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 DDX42Q86XP3 938 aaKnown RBP eCLIP21.24■□□□□ 0.994e-7■■■□□ 18.4
UBE2D3-220ENST00000505307 NUP93Q8N1F7 819 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 KIAA0895Q8NCT3 520 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 PDZD8Q8NEN9 1154 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 GAB3Q8WWW8 586 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 OVCA2Q8WZ82 227 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 ACDQ96AP0 544 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 LOXL4Q96JB6 756 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 B3GNT5Q9BYG0 378 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 DPEP3Q9H4B8 488 aa21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 FBRSL1Q9HCM7 1045 aaKnown RBP21.24■□□□□ 0.99
UBE2D3-220ENST00000505307 PTPRDP23468 1912 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 LRRIQ3A6PVS8 624 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 LEFTY2O00292 366 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms