RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 CSH1P0DML2 217 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 CSH2P0DML3 217 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 HMGA1P17096 107 aaKnown RBP15.29■□□□□ 0.04
USP11-212ENST00000497179 PTPN2P17706 415 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 MAP3K7CLP57077 242 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 BST2Q10589 180 aaKnown RBP15.29■□□□□ 0.04
USP11-212ENST00000497179 AAK1Q2M2I8 961 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 PKDCCQ504Y2 493 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 SPECC1LQ69YQ0 1117 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 GRASPQ7Z6J2 395 aaPredicted RBP15.29■□□□□ 0.04
USP11-212ENST00000497179 DNAJB7Q7Z6W7 309 aaPredicted RBP15.29■□□□□ 0.04
USP11-212ENST00000497179 SLC47A2Q86VL8 602 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 TMC8Q8IU68 726 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 LEMD2Q8NC56 503 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 STKLD1Q8NE28 680 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 GPR152Q8TDT2 470 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 TRMT2BQ96GJ1 504 aaKnown RBP15.29■□□□□ 0.04
USP11-212ENST00000497179 CORO1BQ9BR76 489 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 LRRC3Q9BY71 257 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 TRIM5Q9C035 493 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 WDR6Q9NNW5 1121 aaKnown RBP15.29■□□□□ 0.04
USP11-212ENST00000497179 ASAH2Q9NR71 780 aa15.29■□□□□ 0.04
USP11-212ENST00000497179 HHLA1C9JL84 531 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 M0QYV0 167 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 TNFRSF10BO14763 440 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 GYPCP04921 128 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 RHOP08100 348 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 CYP11B1P15538 503 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 PDE6CP51160 858 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 SLC8A3P57103 927 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 NTHL1P78549 312 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 MTMR3Q13615 1198 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 TRIM14Q14142 442 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 CBX2Q14781 532 aaPredicted RBP15.28■□□□□ 0.04
USP11-212ENST00000497179 PABPC1LQ4VXU2 614 aaKnown RBP15.28■□□□□ 0.04
USP11-212ENST00000497179 PTCRAQ6ISU1 281 aaPredicted RBP15.28■□□□□ 0.04
USP11-212ENST00000497179 DENND5BQ6ZUT9 1274 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 FMNL3Q8IVF7 1028 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 HS6ST3Q8IZP7 471 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 EPS8L1Q8TE68 723 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 MRFAP1L1Q96HT8 127 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 MYRFLQ96LU7 910 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 TTLL2Q9BWV7 592 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 UBXN6Q9BZV1 441 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 ZNF334Q9HCZ1 680 aaPredicted RBP15.28■□□□□ 0.04
USP11-212ENST00000497179 EHD2Q9NZN4 543 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 NOCTQ9UK39 431 aaKnown RBP15.28■□□□□ 0.04
USP11-212ENST00000497179 PCDHGC3Q9UN70 934 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 FAM50BQ9Y247 325 aa15.28■□□□□ 0.04
USP11-212ENST00000497179 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.28■□□□□ 0.04
USP11-212ENST00000497179 C5orf42Q9H799 3197 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 LRRC53A6NM62 1247 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 XPO1O14980 1071 aaKnown RBP15.27■□□□□ 0.04
USP11-212ENST00000497179 FGF19O95750 216 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 FERP16591 822 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 PLA2G4AP47712 749 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 ZNF75DP51815 510 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 SLC5A3P53794 718 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 PDE4CQ08493 712 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 SMAD2Q15796 467 aaKnown RBP15.27■□□□□ 0.04
USP11-212ENST00000497179 TAF12Q16514 161 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 PRSS36Q5K4E3 855 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 DENND1BQ6P3S1 775 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 PDZD4Q76G19 769 aaPredicted RBP15.27■□□□□ 0.04
USP11-212ENST00000497179 NOP9Q86U38 636 aaKnown RBP15.27■□□□□ 0.04
USP11-212ENST00000497179 ZNF677Q86XU0 584 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 NUP93Q8N1F7 819 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 UBA3Q8TBC4 463 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 ATXN2LQ8WWM7 1075 aaKnown RBP15.27■□□□□ 0.04
USP11-212ENST00000497179 DDX1Q92499 740 aaKnown RBP15.27■□□□□ 0.04
USP11-212ENST00000497179 POMKQ9H5K3 350 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 IL21Q9HBE4 155 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 COMMD8Q9NX08 183 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 IL37Q9NZH6 218 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 UXTQ9UBK9 157 aaPredicted RBP15.27■□□□□ 0.04
USP11-212ENST00000497179 CAPN11Q9UMQ6 739 aa15.27■□□□□ 0.04
USP11-212ENST00000497179 UNC80Q8N2C7 3258 aa15.27■□□□□ 0.03
USP11-212ENST00000497179 GREB1Q4ZG55 1949 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 TULP2O00295 520 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 RTN3O95197 1032 aaPredicted RBP15.26■□□□□ 0.03
USP11-212ENST00000497179 CFHP08603 1231 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 CCDC172P0C7W6 258 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 SSTR3P32745 418 aaPredicted RBP15.26■□□□□ 0.03
USP11-212ENST00000497179 GPD2P43304 727 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 USP46P62068 366 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 MRPS5P82675 430 aaKnown RBP15.26■□□□□ 0.03
USP11-212ENST00000497179 ZBED6P86452 979 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 SLC5A9Q2M3M2 681 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 CYP4A22Q5TCH4 519 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 GPRIN1Q7Z2K8 1008 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 PIGZQ86VD9 579 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 GPIHBP1Q8IV16 184 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 SLC35F5Q8WV83 523 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 SECISBP2LQ93073 1101 aaKnown RBP15.26■□□□□ 0.03
USP11-212ENST00000497179 NUCKS1Q9H1E3 243 aaKnown RBP15.26■□□□□ 0.03
USP11-212ENST00000497179 AIPL1Q9NZN9 384 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 NOTCH4Q99466 2003 aa15.26■□□□□ 0.03
USP11-212ENST00000497179 FAM92AA1XBS5 289 aa15.25■□□□□ 0.03
USP11-212ENST00000497179 ZNF197O14709 1029 aa15.25■□□□□ 0.03
USP11-212ENST00000497179 MOSPD3O75425 235 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms