RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CLEC20AQ6ZU45 233 aa14.35□□□□□ -0.11
COL1A1-208ENST00000494334 LUZP1Q86V48 1076 aa14.35□□□□□ -0.11
COL1A1-208ENST00000494334 NUP93Q8N1F7 819 aa14.35□□□□□ -0.11
COL1A1-208ENST00000494334 RBBP8NLQ8NC74 664 aaPredicted RBP14.35□□□□□ -0.11
COL1A1-208ENST00000494334 ST13P5Q8NFI4 369 aaPredicted RBP14.35□□□□□ -0.11
COL1A1-208ENST00000494334 KHSRPQ92945 711 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL1A1-208ENST00000494334 ZSWIM3Q96MP5 696 aa14.35□□□□□ -0.11
COL1A1-208ENST00000494334 KCNK12Q9HB15 430 aa14.35□□□□□ -0.11
COL1A1-208ENST00000494334 UXTQ9UBK9 157 aaPredicted RBP14.35□□□□□ -0.11
COL1A1-208ENST00000494334 DNAJC12Q9UKB3 198 aa14.35□□□□□ -0.11
COL1A1-208ENST00000494334 AJAP1Q9UKB5 411 aaPredicted RBP14.35□□□□□ -0.11
COL1A1-208ENST00000494334 KIAA1257Q9ULG3 409 aa14.35□□□□□ -0.11
COL1A1-208ENST00000494334 ANHXE9PGG2 379 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 TNFRSF10AO00220 468 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 TADA3O75528 432 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 ASGR2P07307 311 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 CD19P15391 556 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 SLC5A3P53794 718 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 CYP4F8P98187 520 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 FKBP15Q5T1M5 1219 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 PARM1Q6UWI2 310 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 RSAD2Q8WXG1 361 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 TFAP2BQ92481 460 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 ZSWIM1Q9BR11 485 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 TTLL2Q9BWV7 592 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 LSM14BQ9BX40 385 aaKnown RBP14.34□□□□□ -0.11
COL1A1-208ENST00000494334 DUSP16Q9BY84 665 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 GPR88Q9GZN0 384 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 MUTYHQ9UIF7 546 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 TSPAN16Q9UKR8 245 aa14.34□□□□□ -0.11
COL1A1-208ENST00000494334 A0A0C4DFX4 3053 aa14.33□□□□□ -0.11
COL1A1-208ENST00000494334 MUC3AQ02505 3323 aa14.33□□□□□ -0.11
COL1A1-208ENST00000494334 LGALS16A8MUM7 142 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 HHLA1C9JL84 531 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 O00370 1275 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 DLL1O00548 723 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 CALCAP01258 141 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 KRT5P13647 590 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 NPR3P17342 541 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 KLK7P49862 253 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 UBXN1Q04323 297 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 ARHGAP15Q53QZ3 475 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 FAM78AQ5JUQ0 283 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 GPR158Q5T848 1215 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 LRSAM1Q6UWE0 723 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 TTC30AQ86WT1 665 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 ANKRD52Q8NB46 1076 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 SCAMP5Q8TAC9 235 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 SHC3Q92529 594 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 FGF14Q92915 247 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 ASB16Q96NS5 453 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 GCNAQ96QF7 691 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 RPP25Q9BUL9 199 aaKnown RBP14.33□□□□□ -0.12
COL1A1-208ENST00000494334 NAA15Q9BXJ9 866 aaKnown RBP14.33□□□□□ -0.12
COL1A1-208ENST00000494334 SLC46A2Q9BY10 475 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 TASP1Q9H6P5 420 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 PLCB1Q9NQ66 1216 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 IL37Q9NZH6 218 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 EHD2Q9NZN4 543 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 IGSF9Q9P2J2 1179 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 SIK3Q9Y2K2 1263 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 FHOD1Q9Y613 1164 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 NUMBLQ9Y6R0 609 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 PTPRDP23468 1912 aa14.33□□□□□ -0.12
COL1A1-208ENST00000494334 DOCK8Q8NF50 2099 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 FOXN3O00409 490 aaPredicted RBP14.32□□□□□ -0.12
COL1A1-208ENST00000494334 RTN3O95197 1032 aaPredicted RBP14.32□□□□□ -0.12
COL1A1-208ENST00000494334 UCHL3P15374 230 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 BRD2P25440 801 aaKnown RBP14.32□□□□□ -0.12
COL1A1-208ENST00000494334 YWHAQP27348 245 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 IFRD2Q12894 506 aaPredicted RBP14.32□□□□□ -0.12
COL1A1-208ENST00000494334 TAF10Q12962 218 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 HTR4Q13639 388 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 SYCP1Q15431 976 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 CNGA2Q16280 664 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 GOLGA7BQ2TAP0 167 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 PKDCCQ504Y2 493 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 TXNDC8Q6A555 127 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 SMYD5Q6GMV2 418 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 LCLAT1Q6UWP7 414 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 GPRIN1Q7Z2K8 1008 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 ZSCAN18Q8TBC5 510 aaPredicted RBP14.32□□□□□ -0.12
COL1A1-208ENST00000494334 MRPS31Q92665 395 aaKnown RBP14.32□□□□□ -0.12
COL1A1-208ENST00000494334 NXPE3Q969Y0 559 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 ERGIC2Q96RQ1 377 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 UBXN6Q9BZV1 441 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 SLITRK6Q9H5Y7 841 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 PNPLA8Q9NP80 782 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 ACP6Q9NPH0 428 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 COMMD8Q9NX08 183 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 HESX1Q9UBX0 185 aa14.32□□□□□ -0.12
COL1A1-208ENST00000494334 TTC28Q96AY4 2481 aa14.31□□□□□ -0.12
COL1A1-208ENST00000494334 FAM92AA1XBS5 289 aa14.31□□□□□ -0.12
COL1A1-208ENST00000494334 TULP2O00295 520 aa14.31□□□□□ -0.12
COL1A1-208ENST00000494334 TEX33O43247 280 aa14.31□□□□□ -0.12
COL1A1-208ENST00000494334 FCARP24071 287 aa14.31□□□□□ -0.12
COL1A1-208ENST00000494334 USP8P40818 1118 aa14.31□□□□□ -0.12
COL1A1-208ENST00000494334 TPM4P67936 248 aa14.31□□□□□ -0.12
COL1A1-208ENST00000494334 PDE4CQ08493 712 aa14.31□□□□□ -0.12
COL1A1-208ENST00000494334 RAPGEF1Q13905 1077 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms