RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ATP11CQ8NB49 1132 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 DNAJB14Q8TBM8 379 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 CAGE1Q8TC20 777 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 TMEM171Q8WVE6 324 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 ELAC2Q9BQ52 826 aaKnown RBP5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 DHX36Q9H2U1 1008 aaKnown RBP5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 PADI4Q9UM07 663 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 SSX2IPQ9Y2D8 614 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 RASA4BC9J798 803 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 RASA4O43374 803 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 RRP9O43818 475 aaKnown RBP5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 EIF5BO60841 1220 aaKnown RBP5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 ONECUT2O95948 504 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 TSHRP16473 764 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 NDUFB7P17568 137 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 KRT4P19013 534 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 TNFSF4P23510 183 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 ADORA2AP29274 412 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 ADRA1BP35368 520 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 GRIA3P42263 894 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 CLCN2P51788 898 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 MAPK10P53779 464 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 ZNF169Q14929 603 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 FAM153CQ494X1 144 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 TREML2Q5T2D2 321 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 RRAGBQ5VZM2 374 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 KCTD20Q7Z5Y7 419 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 FAM186BQ8IYM0 893 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 TXLNBQ8N3L3 684 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 SVIPQ8NHG7 77 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 XAGE5Q8WWM1 108 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 CHFRQ96EP1 664 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 LRRC46Q96FV0 321 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 ZC3H10Q96K80 434 aaKnown RBP5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 RIPOR3Q96MK2 946 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 SORCS2Q96PQ0 1159 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 DPCDQ9BVM2 203 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 MRIQ9BWK5 157 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 FAM83DQ9H4H8 585 aa5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 HEYLQ9NQ87 328 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P38-201ENST00000490557 A1L4Q6 167 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 PSMD9O00233 223 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 SLPIP03973 132 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 FESP07332 822 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 CSF1RP07333 972 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 EBLN1P0CF75 366 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 IDEP14735 1019 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 BTF3P20290 206 aaKnown RBP5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 HMGA2P52926 109 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 UBE4AQ14139 1066 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 PTCHD3Q3KNS1 767 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 ARL13BQ3SXY8 428 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 FAM209BQ5JX69 171 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 AKNAD1Q5T1N1 836 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 KIAA0895LQ68EN5 471 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 MZT2AQ6P582 158 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 GRASPQ7Z6J2 395 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 IZUMO1Q8IYV9 350 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 ABRAQ8N0Z2 381 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 LRRC71Q8N4P6 559 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 OR2C3Q8N628 320 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 GLG1Q92896 1179 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 R3HDM4Q96D70 268 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 DUSP26Q9BV47 211 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 COLEC11Q9BWP8 271 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 MAGEB5Q9BZ81 275 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 ZCWPW1Q9H0M4 648 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 CERS4Q9HA82 394 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 NLRC4Q9NPP4 1024 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 DKK3Q9UBP4 350 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 USP22Q9UPT9 525 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 DMRT1Q9Y5R6 373 aa5.85□□□□□ -1.47
HMGB1P38-201ENST00000490557 VWC2LB2RUY7 222 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 FGFR2P21802 821 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 EPHA3P29320 983 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 LIPAP38571 399 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 ATXN1P54253 815 aaKnown RBP5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 TPTEP56180 551 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 HTRA4P83105 476 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 SP2Q02086 613 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 GRM1Q13255 1194 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 OS9Q13438 667 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 PLAG1Q6DJT9 500 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 ZNF551Q7Z340 670 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 MAVSQ7Z434 540 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 ZNF668Q96K58 619 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 C17orf80Q9BSJ5 609 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 ZNF700Q9H0M5 742 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 IKZF4Q9H2S9 585 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 ARHGEF3Q9NR81 526 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 DNMT3BQ9UBC3 853 aaKnown RBP5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 TLK1Q9UKI8 766 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 ST3GAL5Q9UNP4 418 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 SH2B3Q9UQQ2 575 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 SNX14Q9Y5W7 946 aa5.84□□□□□ -1.47
HMGB1P38-201ENST00000490557 SALL3Q9BXA9 1300 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 LINC00473A8K010 186 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 GCOM1H8Y6P7 765 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 QSOX1O00391 747 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 SNX2O60749 519 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms