RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZDHHC24Q6UX98 284 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 USP49Q70CQ1 688 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 PPP1R32Q7Z5V6 425 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 ADGRE4PQ86SQ3 457 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 GAS2L3Q86XJ1 694 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 C2CD5Q86YS7 1000 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 D2HGDHQ8N465 521 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 PCYOX1LQ8NBM8 494 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 FAM46DQ8NEK8 389 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 TMIEQ8NEW7 156 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 SMCR8Q8TEV9 937 aaPredicted RBP5.21□□□□□ -1.58
VPS13A-211ENST00000484581 MOGAT1Q96PD6 335 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 DDX23Q9BUQ8 820 aaKnown RBP5.21□□□□□ -1.58
VPS13A-211ENST00000484581 OSBPL5Q9H0X9 879 aaPredicted RBP5.21□□□□□ -1.58
VPS13A-211ENST00000484581 PCDHAC1Q9H158 963 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 RIC8AQ9NPQ8 531 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 FEM1BQ9UK73 627 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 ZMYND8Q9ULU4 1186 aaPredicted RBP5.21□□□□□ -1.58
VPS13A-211ENST00000484581 HS3ST4Q9Y661 456 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 A0A087X1B8 175 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 B4E171 279 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 TISP43B9A030 160 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 B9A039 149 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 RAB27BO00194 218 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 FCHO1O14526 889 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 CYP27B1O15528 508 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 ACTL6BO94805 426 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 BAIAP3O94812 1187 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 AGFG2O95081 481 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 POMCP01189 267 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 CKBP12277 381 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 TPH1P17752 444 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 MAKP20794 623 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 MST1P26927 711 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 TSPAN7P41732 249 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 LIFRP42702 1097 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 RAP2BP61225 183 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 VAMP2P63027 116 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 PDE1CQ14123 709 aaPredicted RBP5.2□□□□□ -1.58
VPS13A-211ENST00000484581 ACAP1Q15027 740 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 INSCQ1MX18 579 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 TMTC4Q5T4D3 741 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 PLAG1Q6DJT9 500 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 TBC1D1Q86TI0 1168 aaPredicted RBP5.2□□□□□ -1.58
VPS13A-211ENST00000484581 CPOQ8IVL8 374 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 HERC6Q8IVU3 1022 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 CCDC28AQ8IWP9 274 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 ZNF483Q8TF39 744 aaPredicted RBP5.2□□□□□ -1.58
VPS13A-211ENST00000484581 CACTINQ8WUQ7 758 aaKnown RBP5.2□□□□□ -1.58
VPS13A-211ENST00000484581 RAPGEF4Q8WZA2 1011 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 HDAC2Q92769 488 aaKnown RBP5.2□□□□□ -1.58
VPS13A-211ENST00000484581 RILPL2Q969X0 211 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 ZBTB10Q96DT7 871 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 TMEM176AQ96HP8 235 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 MESP1Q9BRJ9 268 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 TP63Q9H3D4 680 aaPredicted RBP5.2□□□□□ -1.58
VPS13A-211ENST00000484581 FAM83DQ9H4H8 585 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 MLXIPQ9HAP2 919 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 ALG13Q9NP73 1137 aaKnown RBP5.2□□□□□ -1.58
VPS13A-211ENST00000484581 PRDM8Q9NQV8 689 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 FBXO34Q9NWN3 711 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 HESX1Q9UBX0 185 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 REXO2Q9Y3B8 237 aaKnown RBP5.2□□□□□ -1.58
VPS13A-211ENST00000484581 DTNAQ9Y4J8 743 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 PNPLA7Q6ZV29 1317 aa5.2□□□□□ -1.58
VPS13A-211ENST00000484581 CDHR4A6H8M9 788 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 AQP7P3A6NL99 342 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 A6NLC8 198 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 CAPN14A8MX76 684 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 E9PLN8 166 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 hCG_1984214I3L0E3 225 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 IFIT1P09914 478 aaKnown RBP5.19□□□□□ -1.58
VPS13A-211ENST00000484581 FDXRP22570 491 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 SLC5A2P31639 672 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 PTTG1IPP53801 180 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 PNLIPRP1P54315 467 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 AP2B1P63010 937 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 TRPC3Q13507 836 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 BMT2Q1RMZ1 405 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 FAXCQ5TGI0 409 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 RAP1GAP2Q684P5 730 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 FCRL6Q6DN72 434 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 CFAP161Q6P656 301 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 DSTYKQ6XUX3 929 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 DOK3Q7L591 496 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 SLC44A2Q8IWA5 706 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-211ENST00000484581 CCDC117Q8IWD4 279 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-211ENST00000484581 GPR135Q8IZ08 494 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 FITM2Q8N6M3 262 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 CCDC89Q8N998 374 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 SHCBP1Q8NEM2 672 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 SNRNP27Q8WVK2 155 aaKnown RBP5.19□□□□□ -1.58
VPS13A-211ENST00000484581 UBE2Q2Q8WVN8 375 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 RSC1A1Q92681 617 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 SDCCAG3Q96C92 435 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 KLHL32Q96NJ5 620 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 NEUROD6Q96NK8 337 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 VKORC1Q9BQB6 163 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 RTKNQ9BST9 563 aa5.19□□□□□ -1.58
VPS13A-211ENST00000484581 PABPC3Q9H361 631 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms