RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 CCP110O43303 1012 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 CAVIN2O95810 425 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 EBLN1P0CF75 366 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 NHLRC4P0CG21 123 aaPredicted RBP4.58□□□□□ -1.68
CMSS1-204ENST00000479555 NR2F6P10588 404 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 ATF3P18847 181 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 ANXA11P50995 505 aaKnown RBP4.58□□□□□ -1.68
CMSS1-204ENST00000479555 ZNF280AP59817 542 aaPredicted RBP4.58□□□□□ -1.68
CMSS1-204ENST00000479555 IRX1P78414 480 aaPredicted RBP4.58□□□□□ -1.68
CMSS1-204ENST00000479555 SSBP2P81877 361 aaPredicted RBP4.58□□□□□ -1.68
CMSS1-204ENST00000479555 ZNF844Q08AG5 666 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 MLC1Q15049 377 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 WDR43Q15061 677 aaKnown RBP eCLIP4.58□□□□□ -1.68
CMSS1-204ENST00000479555 LLGL1Q15334 1064 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 LRRC41Q15345 812 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 IFIT1BQ5T764 474 aaKnown RBP4.58□□□□□ -1.68
CMSS1-204ENST00000479555 C11orf87Q6NUJ2 197 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 GAS2L3Q86XJ1 694 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 CFAP52Q8N1V2 620 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 OTUD6BQ8N6M0 293 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 MAGEB6Q8N7X4 407 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 B3GALNT2Q8NCR0 500 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 KIF18AQ8NI77 898 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 TBC1D22AQ8WUA7 517 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 TSR2Q969E8 191 aaKnown RBP4.58□□□□□ -1.68
CMSS1-204ENST00000479555 COA7Q96BR5 231 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 ERO1AQ96HE7 468 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 FLRT1Q9NZU1 646 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 DKK3Q9UBP4 350 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 TUBD1Q9UJT1 453 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 JRKLQ9Y4A0 524 aa4.58□□□□□ -1.68
CMSS1-204ENST00000479555 ARHGEF12Q9NZN5 1544 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 CASKIN1Q8WXD9 1431 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 ROCK1Q13464 1354 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 USP47Q96K76 1375 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 CCDC195A0A1B0GUA6 201 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 H0YHG0 523 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 CTAGE5O15320 804 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 ZRANB2O95218 330 aaKnown RBP eCLIP4.57□□□□□ -1.68
CMSS1-204ENST00000479555 BAG4O95429 457 aaKnown RBP4.57□□□□□ -1.68
CMSS1-204ENST00000479555 CD1AP06126 327 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 HNRNPCP07910 306 aaKnown RBP eCLIP4.57□□□□□ -1.68
CMSS1-204ENST00000479555 DRD4P21917 467 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 U2AF2P26368 475 aaKnown RBP eCLIP4.57□□□□□ -1.68
CMSS1-204ENST00000479555 MAP2K2P36507 400 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 MAGEA9P43362 315 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 HLTFQ14527 1009 aaKnown RBP eCLIP4.57□□□□□ -1.68
CMSS1-204ENST00000479555 FAM153CQ494X1 144 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 THEMIS2Q5TEJ8 643 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 TAPT1Q6NXT6 567 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 NOL8Q76FK4 1167 aaKnown RBP4.57□□□□□ -1.68
CMSS1-204ENST00000479555 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.57□□□□□ -1.68
CMSS1-204ENST00000479555 RSPH3Q86UC2 560 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 GPATCH11Q8N954 259 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 IQUBQ8NA54 791 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 SLC17A8Q8NDX2 589 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 NLGN4YQ8NFZ3 816 aaPredicted RBP4.57□□□□□ -1.68
CMSS1-204ENST00000479555 MAP3K14Q99558 947 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 MRPS18AQ9NVS2 196 aaKnown RBP4.57□□□□□ -1.68
CMSS1-204ENST00000479555 ATP6V1DQ9Y5K8 247 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 CFAP20Q9Y6A4 193 aaKnown RBP4.57□□□□□ -1.68
CMSS1-204ENST00000479555 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.57□□□□□ -1.68
CMSS1-204ENST00000479555 PBRM1Q86U86 1689 aa4.57□□□□□ -1.68
CMSS1-204ENST00000479555 SNAPC4Q5SXM2 1469 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 UHRF1BP1Q6BDS2 1440 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 ZNF521Q96K83 1311 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 A6NNZ2 444 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 E9PLN8 166 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 MPHOSPH10O00566 681 aaKnown RBP4.56□□□□□ -1.68
CMSS1-204ENST00000479555 URI1O94763 535 aaPredicted RBP4.56□□□□□ -1.68
CMSS1-204ENST00000479555 IPO7O95373 1038 aaKnown RBP4.56□□□□□ -1.68
CMSS1-204ENST00000479555 TTLL1O95922 423 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 IGKV2-30P06310 120 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 POU2F2P09086 479 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 PDCP20941 246 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 KELP23276 732 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 EPHB2P29323 1055 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 GSCP56915 257 aaPredicted RBP4.56□□□□□ -1.68
CMSS1-204ENST00000479555 SLC10A2Q12908 348 aaPredicted RBP4.56□□□□□ -1.68
CMSS1-204ENST00000479555 HDAC1Q13547 482 aaPredicted RBP4.56□□□□□ -1.68
CMSS1-204ENST00000479555 TUBB8Q3ZCM7 444 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 SUPT20HL1Q3ZLR7 823 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 PABPC1LQ4VXU2 614 aaKnown RBP4.56□□□□□ -1.68
CMSS1-204ENST00000479555 JAKMIP3Q5VZ66 844 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 TTLL5Q6EMB2 1281 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 SLC30A10Q6XR72 485 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 USP45Q70EL2 814 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 TMPRSS9Q7Z410 1059 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 YTHDF3Q7Z739 585 aaKnown RBP4.56□□□□□ -1.68
CMSS1-204ENST00000479555 ERC1Q8IUD2 1116 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 TPH2Q8IWU9 490 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 EFCAB13Q8IY85 973 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 SEMA6DQ8NFY4 1073 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 IFI44Q8TCB0 444 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 WASF1Q92558 559 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 KIF1BPQ96EK5 621 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 VKORC1Q9BQB6 163 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 QTRT1Q9BXR0 403 aaKnown RBP4.56□□□□□ -1.68
CMSS1-204ENST00000479555 PACSIN1Q9BY11 444 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 SMOC2Q9H3U7 446 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms