RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 NFICP08651 508 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 ATF2P15336 505 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 NCKAP1LP55160 1127 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 BASP1P80723 227 aaKnown RBP12.9□□□□□ -0.34
USP11-206ENST00000469080 FOXD4Q12950 439 aaPredicted RBP12.9□□□□□ -0.34
USP11-206ENST00000469080 ACAD10Q6JQN1 1059 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 C1orf228Q6PIY5 440 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 KLF6Q99612 283 aaPredicted RBP12.9□□□□□ -0.34
USP11-206ENST00000469080 ALG13Q9NP73 1137 aaKnown RBP12.9□□□□□ -0.34
USP11-206ENST00000469080 PIH1D1Q9NWS0 290 aaKnown RBP12.9□□□□□ -0.34
USP11-206ENST00000469080 CTNNAL1Q9UBT7 734 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 PCDHB2Q9Y5E7 798 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 SYNGAP1Q96PV0 1343 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 GOLGA8RI6L899 631 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 HCRTO43612 131 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 RPL21P46778 160 aaKnown RBP12.89□□□□□ -0.35
USP11-206ENST00000469080 FAM102AQ5T9C2 384 aaPredicted RBP12.89□□□□□ -0.35
USP11-206ENST00000469080 METTL7BQ6UX53 244 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 PPP1R21Q6ZMI0 780 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 RFX6Q8HWS3 928 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 LMO3Q8TAP4 145 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 MPP4Q96JB8 637 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 ADPGKQ9BRR6 497 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 NSRP1Q9H0G5 558 aaKnown RBP12.89□□□□□ -0.35
USP11-206ENST00000469080 PGAP2Q9UHJ9 254 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 ANAPC5Q9UJX4 755 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 TIMM13Q9Y5L4 95 aaPredicted RBP12.89□□□□□ -0.35
USP11-206ENST00000469080 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 UBE4BO95155 1302 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 TAS2R40P59535 323 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 EMC10Q5UCC4 262 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 FAAH2Q6GMR7 532 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 SLFN12LQ6IEE8 588 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 OR6J1Q8NGC5 347 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 SREK1Q8WXA9 508 aaKnown RBP12.89□□□□□ -0.35
USP11-206ENST00000469080 ZBED3Q96IU2 234 aaPredicted RBP12.89□□□□□ -0.35
USP11-206ENST00000469080 SMYD3Q9H7B4 428 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 RRAGCQ9HB90 399 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 GTPBP10A4D1E9 387 aaKnown RBP12.89□□□□□ -0.35
USP11-206ENST00000469080 LCA5LO95447 670 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 ACADSP16219 412 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 KRT15P19012 456 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 CCNG1P51959 295 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 HUNKP57058 714 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 ZNF200P98182 395 aaPredicted RBP12.89□□□□□ -0.35
USP11-206ENST00000469080 TTC27Q6P3X3 843 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 FAM71AQ8IYT1 594 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 CXorf38Q8TB03 319 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 STK32AQ8WU08 396 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 MAK16Q9BXY0 300 aaKnown RBP12.89□□□□□ -0.35
USP11-206ENST00000469080 FAM192AQ9GZU8 254 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 DRC3Q9H069 523 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 GOLGA2P5Q9HBQ8 144 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 PRELID1Q9Y255 219 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 INPP5FQ9Y2H2 1132 aa12.89□□□□□ -0.35
USP11-206ENST00000469080 EVPLQ92817 2033 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 ADCY3O60266 1144 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 SPAG7O75391 227 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 GAS8O95995 478 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 TXNRD3NBQ6F5E7 133 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 ACOT1Q86TX2 421 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 SLC13A5Q86YT5 568 aaPredicted RBP12.88□□□□□ -0.35
USP11-206ENST00000469080 CD302Q8IX05 232 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 PRELID2Q8N945 189 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 HASPINQ8TF76 798 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 SHC3Q92529 594 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 CATSPER2Q96P56 530 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 PCYT2Q99447 389 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 ERP44Q9BS26 406 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 SPATA16Q9BXB7 569 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 NDEL1Q9GZM8 345 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 METTL5Q9NRN9 209 aaKnown RBP12.88□□□□□ -0.35
USP11-206ENST00000469080 SEPT10Q9P0V9 454 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 RNF14Q9UBS8 474 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 PASKQ96RG2 1323 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 CCDC78A2IDD5 438 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 VARSP26640 1264 aaKnown RBP12.88□□□□□ -0.35
USP11-206ENST00000469080 PMS2P54278 862 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 ARPC4P59998 168 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 IFI35P80217 286 aaPredicted RBP12.88□□□□□ -0.35
USP11-206ENST00000469080 GPS1Q13098 491 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 ITIH4Q14624 930 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 TMED2Q15363 201 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 SRRM1Q8IYB3 904 aaKnown RBP12.88□□□□□ -0.35
USP11-206ENST00000469080 MCOLN2Q8IZK6 566 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 SIX5Q8N196 739 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 RAB3IPQ96QF0 476 aaPredicted RBP12.88□□□□□ -0.35
USP11-206ENST00000469080 TMEM121Q9BTD3 319 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 MRGBPQ9NV56 204 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 GTF3C4Q9UKN8 822 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 PIN4Q9Y237 131 aaKnown RBP12.88□□□□□ -0.35
USP11-206ENST00000469080 RPTORQ8N122 1335 aa12.88□□□□□ -0.35
USP11-206ENST00000469080 A6NJR5 290 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 H3BRB1 525 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 H7C0C1 242 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 CCDC188H7C350 402 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 STAG3L1P0CL83 205 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 LCP1P13796 627 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 CHN1P15882 459 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 NAMPTP43490 491 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms