RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 NPNTQ6UXI9 565 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 RSAD2Q8WXG1 361 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 IFT43Q96FT9 208 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 FAM161BQ96MY7 647 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 MSTO1Q9BUK6 570 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 C17orf75Q9HAS0 396 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 SLC38A10Q9HBR0 1119 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 FBXO40Q9UH90 709 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 PCSK1NQ9UHG2 260 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 UTRNP46939 3433 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 HNRNPCL1O60812 293 aaKnown RBP12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 DNAJC6O75061 913 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 LRCH4O75427 683 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 RGS20O76081 388 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 WEE2P0C1S8 567 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 UBTFL6P0CB48 400 aaPredicted RBP12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 RARBP10826 455 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 KCNA3P22001 575 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 YY1P25490 414 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 PSMA2P25787 234 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 PTPN7P35236 360 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 GCLCP48506 637 aaPredicted RBP12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 BAATQ14032 418 aaPredicted RBP12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 SH2D5Q6ZV89 423 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 UBR7Q8N806 425 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 ZNF526Q8TF50 670 aaPredicted RBP12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 APOPT1Q96IL0 206 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 CGRRF1Q99675 332 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 PPCSQ9HAB8 311 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 MARCOQ9UEW3 520 aaPredicted RBP12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 CYTH4Q9UIA0 394 aa12.27□□□□□ -0.44
PDZRN3-203ENST00000462146 ABLIM1O14639 778 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 CALB1P05937 261 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 KITP10721 976 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 KCNA2P16389 499 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 OCRLQ01968 901 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 GHRHRQ02643 423 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 DLGAP5Q15398 846 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 CCDC62Q6P9F0 684 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 PCGF5Q86SE9 256 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 CCNJLQ8IV13 435 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 NLGN1Q8N2Q7 840 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 MCPH1Q8NEM0 835 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 LRRN4Q8WUT4 740 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 STMN2Q93045 179 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 SYNCQ9H7C4 482 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 CNTN3Q9P232 1028 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 TBXAS1P24557 533 aaPredicted RBP12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 PGM1P36871 562 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 SERPINB4P48594 390 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 MYL6P60660 151 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 YWHAGP61981 247 aaKnown RBP eCLIP12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 ORC1Q13415 861 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 EMC2Q15006 297 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 PTPN20Q4JDL3 420 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 ZC3H12AQ5D1E8 599 aaKnown RBP12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 CIAPIN1Q6FI81 312 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 MTMR12Q9C0I1 747 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 ZCWPW1Q9H0M4 648 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 DDX56Q9NY93 547 aaKnown RBP12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 STX18Q9P2W9 335 aaKnown RBP12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 FETUBQ9UGM5 382 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 STRIP2Q9ULQ0 834 aa12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 MTO1Q9Y2Z2 717 aaKnown RBP12.27□□□□□ -0.45
PDZRN3-203ENST00000462146 PSME4Q14997 1843 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 B2RBV5 119 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 CYB561D2O14569 222 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 USP1O94782 785 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 KDELR1P24390 212 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 RAB27AP51159 221 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 CACNA2D1P54289 1103 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 AP1B1Q10567 949 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 PIGHQ14442 188 aaPredicted RBP12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 RAB6CQ53S08 254 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 AP1ARQ63HQ0 302 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 CWF19L1Q69YN2 538 aaKnown RBP12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 DENND1BQ6P3S1 775 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 CHSY1Q86X52 802 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 PDIK1LQ8N165 341 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 SLC25A41Q8N5S1 370 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 ATP6V0A1Q93050 837 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 CFAP36Q96G28 342 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 RAB6CQ9H0N0 254 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 CISHQ9NSE2 258 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 STYXL1Q9Y6J8 313 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 UGT1A9O60656 530 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 SNUPNO95149 360 aaKnown RBP12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 SKIP12755 728 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 KDSRQ06136 332 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 MMRN1Q13201 1228 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 ZBTB33Q86T24 672 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 RFX6Q8HWS3 928 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 RBM15BQ8NDT2 890 aaKnown RBP12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 HSPH1Q92598 858 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 ALKBH8Q96BT7 664 aaKnown RBP12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 CYTH2Q99418 400 aa12.26□□□□□ -0.45
PDZRN3-203ENST00000462146 TRIM56Q9BRZ2 755 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms