RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 ZC3H11AO75152 810 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 ALDH1A2O94788 518 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 DDX58O95786 925 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 DNTTP04053 509 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 HDCP19113 662 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 DNAJB1P25685 340 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 AXLP30530 894 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 ETFBP38117 255 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 CETN2P41208 172 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 ECE1P42892 770 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 AMPHP49418 695 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 ARHGDIBP52566 201 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 HADHBP55084 474 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 CASP7P55210 303 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 RPP38P78345 283 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 OLR1P78380 273 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 BEX3Q00994 111 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 NIPAL4Q0D2K0 466 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 CBX3Q13185 183 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 DYNC1I2Q13409 638 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 CUL3Q13618 768 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 MXD4Q14582 209 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 WDR43Q15061 677 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 ASIC2Q16515 512 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 CCDC40Q4G0X9 1142 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 AARDQ4LEZ3 155 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 MIS18BP1Q6P0N0 1132 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 ALKBH5Q6P6C2 394 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 TUBA3EQ6PEY2 450 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 C6orf89Q6UWU4 347 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 BRAPQ7Z569 592 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 LUZP1Q86V48 1076 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 VSIG1Q86XK7 387 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 CPNE8Q86YQ8 564 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 TRMT2AQ8IZ69 625 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 KCNH5Q8NCM2 988 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 SHCBP1Q8NEM2 672 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 OR6P1Q8NGX9 317 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 DEPTORQ8TB45 409 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 RUFY2Q8WXA3 655 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 HDAC2Q92769 488 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 KIFAP3Q92845 792 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 SMARCE1Q969G3 411 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 ATP6V1G3Q96LB4 118 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 JAKMIP1Q96N16 626 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 TTC25Q96NG3 672 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 ACAP3Q96P50 834 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 RMDN3Q96TC7 470 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 MPHOSPH8Q99549 860 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 EIF3CQ99613 913 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 BARD1Q99728 777 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 C11orf84Q9BUA3 381 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 ZNF408Q9H9D4 720 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 UCK1Q9HA47 277 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 C12orf10Q9HB07 376 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 SCPEP1Q9HB40 452 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 PRDM11Q9NQV5 511 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 KLHL11Q9NVR0 708 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 SLC39A1Q9NY26 324 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 TBC1D14Q9P2M4 693 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 CIDEBQ9UHD4 219 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 AMACRQ9UHK6 382 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 PHTF1Q9UMS5 762 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 LIMCH1Q9UPQ0 1083 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 C15orf41Q9Y2V0 281 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 PCDHB4Q9Y5E5 795 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 BZW2Q9Y6E2 419 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 GCC2Q8IWJ2 1684 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 MIA2Q96PC5 1412 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 NSD2O96028 1365 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 UGGT2Q9NYU1 1516 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 SH3TC1Q8TE82 1336 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 TCOF1Q13428 1488 aaKnown RBP5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 E2F3O00716 465 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 APOL1O14791 398 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 LIN7AO14910 233 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 CHUKO15111 745 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 BIRC5O15392 142 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 TLR5O60602 858 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 TMEM127O75204 238 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 FGF18O76093 207 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 GOSR1O95249 250 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 ZBTB7AO95365 584 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 ADCY5O95622 1261 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 ATP5BP06576 529 aaKnown RBP5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 PDHA1P08559 390 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 CCDC166P0CW27 439 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 CSF2RAP15509 400 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 RFC4P35249 363 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 THBS2P35442 1172 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 TRIM23P36406 574 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 HNF4AP41235 474 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 CBX5P45973 191 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 VPS41P49754 854 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 PLCD1P51178 756 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 GUCY2FP51841 1108 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 TKTL1P51854 596 aa5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 ALDH18A1P54886 795 aaKnown RBP5.03□□□□□ -1.6
HMGB3P9-201ENST00000441799 GPR85P60893 370 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms