RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 CYP3A43Q9HB55 503 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.29■□□□□ 0.2
NUP50-204ENST00000417702 NUP210Q8TEM1 1887 aaPredicted RBP16.29■□□□□ 0.2
NUP50-204ENST00000417702 MIA3Q5JRA6 1907 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 SLC16A3O15427 465 aaKnown RBP16.28■□□□□ 0.2
NUP50-204ENST00000417702 GADD45BO75293 160 aaPredicted RBP16.28■□□□□ 0.2
NUP50-204ENST00000417702 CCNE1P24864 410 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 NBL1P41271 181 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 ASPAP45381 313 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 RPS9P46781 194 aaKnown RBP16.28■□□□□ 0.2
NUP50-204ENST00000417702 PPP3CCP48454 512 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 MXI1P50539 228 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 ANKRD40Q6AI12 368 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 ISM2Q6H9L7 571 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 FAM35AQ86V20 835 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 SMARCD1Q96GM5 515 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 DHTKD1Q96HY7 919 aaPredicted RBP16.28■□□□□ 0.2
NUP50-204ENST00000417702 SLITRK1Q96PX8 696 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 TTLL2Q9BWV7 592 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 GKN1Q9NS71 199 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 GTSE1Q9NYZ3 720 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 MAN1B1Q9UKM7 699 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 CCL26Q9Y258 94 aa16.28■□□□□ 0.2
NUP50-204ENST00000417702 ZNF638Q14966 1978 aaKnown RBP16.27■□□□□ 0.2
NUP50-204ENST00000417702 SHISA7A6NL88 538 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 LAMTOR5O43504 91 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 RTN3O95197 1032 aaPredicted RBP16.27■□□□□ 0.2
NUP50-204ENST00000417702 PFKLP17858 780 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 HDCP19113 662 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 CACNA2D1P54289 1103 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 MCCD1P59942 119 aaPredicted RBP16.27■□□□□ 0.2
NUP50-204ENST00000417702 USP46P62068 366 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 IFRD2Q12894 506 aaPredicted RBP16.27■□□□□ 0.2
NUP50-204ENST00000417702 ITPRIPL2Q3MIP1 535 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 DCAF17Q5H9S7 520 aaPredicted RBP16.27■□□□□ 0.2
NUP50-204ENST00000417702 TCERG1LQ5VWI1 586 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 RALGPS2Q86X27 583 aaPredicted RBP16.27■□□□□ 0.2
NUP50-204ENST00000417702 NUP93Q8N1F7 819 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 CRYBG2Q8N1P7 616 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 ARL14EPQ8N8R7 260 aaPredicted RBP16.27■□□□□ 0.2
NUP50-204ENST00000417702 FBXL13Q8NEE6 735 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 TTC8Q8TAM2 541 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 CYP2S1Q96SQ9 504 aa16.27■□□□□ 0.2
NUP50-204ENST00000417702 APOBEC3GQ9HC16 384 aaKnown RBP16.27■□□□□ 0.2
NUP50-204ENST00000417702 DMAP1Q9NPF5 467 aaPredicted RBP16.27■□□□□ 0.2
NUP50-204ENST00000417702 DENND4CQ5VZ89 1909 aa16.27■□□□□ 0.19
NUP50-204ENST00000417702 COL4A3Q01955 1670 aa16.27■□□□□ 0.19
NUP50-204ENST00000417702 RIF1Q5UIP0 2472 aaKnown RBP16.26■□□□□ 0.19
NUP50-204ENST00000417702 PTPRDP23468 1912 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 TICRRQ7Z2Z1 1910 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 C2orf78A6NCI8 922 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 ZNF840PA6NDX5 716 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 PROB1E7EW31 1015 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 SPECC1L-ADORA2AF8WAN1 911 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 AP1G2O75843 785 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 ABL1P00519 1130 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 YWHAQP27348 245 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 CTHP32929 405 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 SOX9P48436 509 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 PMS1P54277 932 aaKnown RBP16.26■□□□□ 0.19
NUP50-204ENST00000417702 TNK2Q07912 1038 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 INCA1Q0VD86 236 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 TAF10Q12962 218 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 ORC1Q13415 861 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 PDGFRLQ15198 375 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 WDR44Q5JSH3 913 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 FRMD5Q7Z6J6 570 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 ZC3H3Q8IXZ2 948 aaKnown RBP16.26■□□□□ 0.19
NUP50-204ENST00000417702 FUKQ8N0W3 1084 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 TTC16Q8NEE8 873 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 FAXDC2Q96IV6 333 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 KCNK16Q96T55 309 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 FAM83CQ9BQN1 747 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 NT5C1AQ9BXI3 368 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 LMAN1LQ9HAT1 526 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 KRT82Q9NSB4 513 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 TMEM30AQ9NV96 361 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 RAB20Q9NX57 234 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 GCNT4Q9P109 453 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 HMGXB4Q9UGU5 601 aa16.26■□□□□ 0.19
NUP50-204ENST00000417702 ARMCX3Q9UH62 379 aaPredicted RBP16.26■□□□□ 0.19
NUP50-204ENST00000417702 TRIM49BA6NDI0 452 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 GFRA3O60609 400 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 SP9P0CG40 484 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 CCDC130P13994 396 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 CD58P19256 250 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 UBE2HP62256 183 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 AMPD2Q01433 879 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 FZD5Q13467 585 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 LRRC32Q14392 662 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 MTF1Q14872 753 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 KLHL10Q6JEL2 608 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 PAQR9Q6ZVX9 377 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 ZNF687Q8N1G0 1237 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 TTC39CQ8N584 583 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 PDZD8Q8NEN9 1154 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 SLC2A14Q8TDB8 520 aa16.25■□□□□ 0.19
NUP50-204ENST00000417702 NKD2Q969F2 451 aaPredicted RBP16.25■□□□□ 0.19
NUP50-204ENST00000417702 FBXO32Q969P5 355 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms