RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CATSPER4Q7RTX7 472 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 POLNQ7Z5Q5 900 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 ACOT1Q86TX2 421 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 TTC30AQ86WT1 665 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 SLC35B2Q8TB61 432 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 SNX27Q96L92 541 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 XPO6Q96QU8 1125 aaKnown RBP15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 RBM15Q96T37 977 aaKnown RBP eCLIP15.94■□□□□ 0.145e-6■■■□□ 18.3
SCAMP4-202ENST00000409472 DPEP3Q9H4B8 488 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 CYP3A43Q9HB55 503 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 GOLGA8MH3BSY2 632 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 DNALI1O14645 258 aaPredicted RBP15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 GABBR2O75899 941 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 VDRP11473 427 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 KDELR1P24390 212 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 GABRB2P47870 512 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 PLCB3Q01970 1234 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 CNGA2Q16280 664 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 ERMARDQ5T6L9 678 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 MFSD5Q6N075 450 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 CAPN12Q6ZSI9 719 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 YTHDF3Q7Z739 585 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 ZNF410Q86VK4 478 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 FNIP1Q8TF40 1166 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 CD248Q9HCU0 757 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 MLXIPLQ9NP71 852 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 DDX56Q9NY93 547 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 TBK1Q9UHD2 729 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 SGK1O00141 431 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 F2P00734 622 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 HMGCRP04035 888 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 CETN2P41208 172 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 IFNAR2P48551 515 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 BEX3Q00994 111 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 ADCY1Q08828 1119 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 PMF1Q6P1K2 205 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 DRICH1Q6PGQ1 229 aaPredicted RBP15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 NKD2Q969F2 451 aaPredicted RBP15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 KLK14Q9P0G3 267 aa15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 GNEQ9Y223 722 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-202ENST00000409472 PDCD11Q14690 1871 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 IGF2BP3O00425 579 aaKnown RBP eCLIP15.92■□□□□ 0.144e-9■□□□□ 8.1
SCAMP4-202ENST00000409472 PAX7P23759 505 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 COPS2P61201 443 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 ZNF268Q14587 947 aaPredicted RBP15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 LRRC14Q15048 493 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 CCDC142Q17RM4 750 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 ANKRD22Q5VYY1 191 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 NAIF1Q69YI7 327 aaPredicted RBP15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 NPNTQ6UXI9 565 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 ZCCHC9Q8N567 271 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 DNAJB3Q8WWF6 145 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 NT5C1AQ9BXI3 368 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 GOLGA2P5Q9HBQ8 144 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 SAYSD1Q9NPB0 183 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 SLC5A4Q9NY91 659 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 DDX20Q9UHI6 824 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 USP18Q9UMW8 372 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 A6NJR5 290 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 RECQL4O94761 1208 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 CYP2C9P11712 490 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 P4HA1P13674 534 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 CAV1Q03135 178 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 ZNF618Q5T7W0 954 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 OR6B2Q6IFH4 312 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 SLC27A1Q6PCB7 646 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 VSTM1Q6UX27 236 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 TLK2Q86UE8 772 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 MGARPQ8TDB4 240 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 RXFP2Q8WXD0 754 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 CFAP57Q96MR6 1250 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 PRMT1Q99873 361 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 CALN1Q9BXU9 219 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 B3GNT5Q9BYG0 378 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 CNOT10Q9H9A5 744 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 KLC4Q9NSK0 619 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 GPATCH2LQ9NWQ4 482 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 ZNF236Q9UL36 1845 aa15.92■□□□□ 0.14
SCAMP4-202ENST00000409472 TREHO43280 583 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 TRUB2O95900 331 aaKnown RBP15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 TFE3P19532 575 aaPredicted RBP15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 MAGEA4P43358 317 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 ATP11AP98196 1134 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 MPP2Q14168 576 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 TAZQ16635 292 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 SPRED3Q2MJR0 410 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 RNASEH2BQ5TBB1 312 aaKnown RBP15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 IQSEC1Q6DN90 963 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 LCLAT1Q6UWP7 414 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 LRRN4Q8WUT4 740 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 ARHGEF2Q92974 986 aaKnown RBP15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 C2CD4BA6NLJ0 364 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 SPTLC1O15269 473 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 PIAS1O75925 651 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 ITGAVP06756 1048 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 KRT7P08729 469 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 DRD4P21917 467 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 MYO1EQ12965 1108 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms