RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ADSSL1Q8N142 457 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 C3orf20Q8ND61 904 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 CHST13Q8NET6 341 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 Q8NFD4 153 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 SCAMP5Q8TAC9 235 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 GDAP1Q8TB36 358 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 SPATA18Q8TC71 538 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 CSGALNACT1Q8TDX6 532 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 ADAMTS17Q8TE56 1095 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 TAF4BQ92750 862 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 ZNF764Q96H86 408 aaPredicted RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 MAML3Q96JK9 1138 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 SAMD11Q96NU1 681 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 TRIM6Q9C030 488 aaPredicted RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 TAF1DQ9H5J8 278 aaPredicted RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 PNPOQ9NVS9 261 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 PCDHA6Q9UN73 950 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 COG5Q9UP83 839 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 CLCA2Q9UQC9 943 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 HDAC5Q9UQL6 1122 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 ENDOD1O94919 500 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 SLU7O95391 586 aaKnown RBP5.41□□□□□ -1.54
GABPB1-204ENST00000396464 CHGBP05060 677 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 RPLP2P05387 115 aaKnown RBP5.41□□□□□ -1.54
GABPB1-204ENST00000396464 LAMP2P13473 410 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 MCAMP43121 646 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 AARSP49588 968 aaKnown RBP eCLIP5.41□□□□□ -1.54
GABPB1-204ENST00000396464 RAD23AP54725 363 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 ADAM17P78536 824 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 MAMLD1Q13495 774 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 KCNB1Q14721 858 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 DUSP28Q4G0W2 176 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 MCTP2Q6DN12 878 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 EP400NLQ6ZTU2 488 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 USP51Q70EK9 711 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 CCDC117Q8IWD4 279 aaPredicted RBP5.41□□□□□ -1.54
GABPB1-204ENST00000396464 THNSL1Q8IYQ7 743 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 LGI4Q8N135 537 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 TTC39CQ8N584 583 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 SH3RF3Q8TEJ3 882 aaPredicted RBP5.41□□□□□ -1.54
GABPB1-204ENST00000396464 RAB24Q969Q5 203 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 FAM167AQ96KS9 214 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 P2RX7Q99572 595 aaKnown RBP5.41□□□□□ -1.54
GABPB1-204ENST00000396464 MYL10Q9BUA6 226 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 ACAT2Q9BWD1 397 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 TWSG1Q9GZX9 223 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 ABHD16BQ9H3Z7 469 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 RABEP2Q9H5N1 569 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 BRF2Q9HAW0 419 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 ERVK-5Q9HDB9 667 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 PRDM8Q9NQV8 689 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 CNNM1Q9NRU3 951 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 SPATA6Q9NWH7 488 aaPredicted RBP5.41□□□□□ -1.54
GABPB1-204ENST00000396464 BTG4Q9NY30 223 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 RGL1Q9NZL6 768 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.41□□□□□ -1.54
GABPB1-204ENST00000396464 USP15Q9Y4E8 981 aaPredicted RBP5.41□□□□□ -1.54
GABPB1-204ENST00000396464 HS3ST4Q9Y661 456 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 CDY2AQ9Y6F7 541 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 EPN1Q9Y6I3 576 aaPredicted RBP5.41□□□□□ -1.54
GABPB1-204ENST00000396464 NUMBLQ9Y6R0 609 aa5.41□□□□□ -1.54
GABPB1-204ENST00000396464 ST20-MTHFSA0A0A6YYL1 179 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 CCDC78A2IDD5 438 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 TRIM43BA6NCK2 446 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 SH2B2O14492 632 aaPredicted RBP5.4□□□□□ -1.54
GABPB1-204ENST00000396464 CAPN9O14815 690 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 VILLO15195 856 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 APOL3O95236 402 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 AFPP02771 609 aaKnown RBP5.4□□□□□ -1.54
GABPB1-204ENST00000396464 CLEC3BP05452 202 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 CSE1LP55060 971 aaKnown RBP5.4□□□□□ -1.54
GABPB1-204ENST00000396464 AP2B1P63010 937 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.4□□□□□ -1.54
GABPB1-204ENST00000396464 ADCY2Q08462 1091 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 SPIRE1Q08AE8 756 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 EPS8Q12929 822 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 PRPF4BQ13523 1007 aaKnown RBP5.4□□□□□ -1.54
GABPB1-204ENST00000396464 COG2Q14746 738 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 ADIPOQQ15848 244 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 KYNUQ16719 465 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 WSCD2Q2TBF2 565 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 MUM1L1Q5H9M0 696 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 CD300LDQ6UXZ3 194 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 DENND5BQ6ZUT9 1274 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 ZNF804AQ7Z570 1209 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 NME9Q86XW9 330 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 TAGAPQ8N103 731 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 CCAR2Q8N163 923 aaKnown RBP5.4□□□□□ -1.54
GABPB1-204ENST00000396464 ZNF540Q8NDQ6 660 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 GSDMBQ8TAX9 411 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 USP6NLQ92738 828 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 FATE1Q969F0 183 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 TRIM43Q96BQ3 446 aaPredicted RBP5.4□□□□□ -1.54
GABPB1-204ENST00000396464 KIF1BPQ96EK5 621 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 DMRTA2Q96SC8 542 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 REEP2Q9BRK0 252 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 ADI1Q9BV57 179 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 TRIM54Q9BYV2 358 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 USP44Q9H0E7 712 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 SARS2Q9NP81 518 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms