RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 PDK2Q15119 407 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 STX19Q8N4C7 294 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 NT5C1AQ9BXI3 368 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 CASS4Q9NQ75 786 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 CPS1P31327 1500 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 A0A1B0GW55 424 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 MED24O75448 989 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 DUX4L2P0CJ85 424 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 DUX4L3P0CJ86 424 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 DUX4L4P0CJ87 422 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 DUX4L5P0CJ88 424 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 DUX4L6P0CJ89 424 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 DUX4L7P0CJ90 424 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 TBL3Q12788 808 aaKnown RBP17.83■□□□□ 0.45
SIN3A-203ENST00000394949 SPOCD1Q6ZMY3 1216 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 LPCAT2Q7L5N7 544 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 TAGAPQ8N103 731 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 PDCD6IPQ8WUM4 868 aaKnown RBP17.83■□□□□ 0.45
SIN3A-203ENST00000394949 SPON2Q9BUD6 331 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 SIK2Q9H0K1 926 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 ABCF3Q9NUQ8 709 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 NINJ2Q9NZG7 142 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 DUX4Q9UBX2 424 aa17.83■□□□□ 0.45
SIN3A-203ENST00000394949 CORO1CQ9ULV4 474 aaPredicted RBP17.83■□□□□ 0.45
SIN3A-203ENST00000394949 DNALI1O14645 258 aaPredicted RBP17.83■□□□□ 0.44
SIN3A-203ENST00000394949 PPIDQ08752 370 aaKnown RBP17.83■□□□□ 0.44
SIN3A-203ENST00000394949 EMC2Q15006 297 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 LINC00116Q8NCU8 138 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 OR6J1Q8NGC5 347 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 AFG1LQ8WV93 481 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 FAM162AQ96A26 154 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 ZNF556Q9HAH1 456 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 METTL5Q9NRN9 209 aaKnown RBP17.83■□□□□ 0.44
SIN3A-203ENST00000394949 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.83■□□□□ 0.44
SIN3A-203ENST00000394949 SLIT1O75093 1534 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 SDR42E2A6NKP2 422 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 SERPINI2O75830 405 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 CYP2C8P10632 490 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 OTUD4Q01804 1114 aaKnown RBP17.83■□□□□ 0.44
SIN3A-203ENST00000394949 CCDC85BQ15834 202 aaPredicted RBP17.83■□□□□ 0.44
SIN3A-203ENST00000394949 PDPK2PQ6A1A2 396 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 ZNF483Q8TF39 744 aaPredicted RBP17.83■□□□□ 0.44
SIN3A-203ENST00000394949 ELP3Q9H9T3 547 aa17.83■□□□□ 0.44
SIN3A-203ENST00000394949 DPYSL4O14531 572 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 ZNF197O14709 1029 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 LIN7AO14910 233 aaPredicted RBP17.82■□□□□ 0.44
SIN3A-203ENST00000394949 MSH4O15457 936 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 CDK16Q00536 496 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 MTM1Q13496 603 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 NOP9Q86U38 636 aaKnown RBP17.82■□□□□ 0.44
SIN3A-203ENST00000394949 ATPAF2Q8N5M1 289 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 SH3TC2Q8TF17 1288 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 GDPD5Q8WTR4 605 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 TFB1MQ8WVM0 346 aaKnown RBP17.82■□□□□ 0.44
SIN3A-203ENST00000394949 PCDHA3Q9Y5H8 950 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 SLC25A27O95847 323 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 VCAM1P19320 739 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 SERPINB5P36952 375 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 RGS7P49802 495 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 VCPP55072 806 aaKnown RBP17.82■□□□□ 0.44
SIN3A-203ENST00000394949 KYQ8NBH2 561 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 RNF217Q8TC41 542 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 ZNF398Q8TD17 642 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 APOPT1Q96IL0 206 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 VPS50Q96JG6 964 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 PI4K2AQ9BTU6 479 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 FARP1Q9Y4F1 1045 aaPredicted RBP17.82■□□□□ 0.44
SIN3A-203ENST00000394949 PSMG1O95456 288 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 PTK2BQ14289 1009 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 LAYNQ6UX15 382 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 ZBTB49Q6ZSB9 765 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 TMEM237Q96Q45 408 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 INTS13Q9NVM9 706 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 MPP6Q9NZW5 540 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 MROH7Q68CQ1 1323 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 BTNL10A8MVZ5 291 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 LSM8O95777 96 aaKnown RBP17.82■□□□□ 0.44
SIN3A-203ENST00000394949 RPS6P62753 249 aaKnown RBP17.82■□□□□ 0.44
SIN3A-203ENST00000394949 TMEM132DQ14C87 1099 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 STYK1Q6J9G0 422 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 CROCCP3Q8IVE0 287 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 SHCBP1Q8NEM2 672 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 ZNF75CPQ92670 426 aaPredicted RBP17.82■□□□□ 0.44
SIN3A-203ENST00000394949 OTUB1Q96FW1 271 aaPredicted RBP17.82■□□□□ 0.44
SIN3A-203ENST00000394949 SH3GL2Q99962 352 aa17.82■□□□□ 0.44
SIN3A-203ENST00000394949 FAM32AQ9Y421 112 aaKnown RBP17.82■□□□□ 0.44
SIN3A-203ENST00000394949 ABLIM1O14639 778 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 CPB1P15086 417 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 RRM1P23921 792 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 AMPD2Q01433 879 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 CNGA2Q16280 664 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 COBLL1Q53SF7 1204 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 CLEC10AQ8IUN9 316 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 CCDC60Q8IWA6 550 aaPredicted RBP17.81■□□□□ 0.44
SIN3A-203ENST00000394949 DEFB107AQ8IZN7 70 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 LRRC4BQ9NT99 713 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 MAP3K20Q9NYL2 800 aaKnown RBP17.81■□□□□ 0.44
SIN3A-203ENST00000394949 PIN4Q9Y237 131 aaKnown RBP17.81■□□□□ 0.44
SIN3A-203ENST00000394949 GH1P01241 217 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 NUDT17P0C025 328 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms