RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 STRIP2Q9ULQ0 834 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 RPA3P35244 121 aaPredicted RBP16.14■□□□□ 0.17
CPSF7-202ENST00000394888 NDST1P52848 882 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 DCUN1D2Q6PH85 259 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 LCLAT1Q6UWP7 414 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 ECHDC2Q86YB7 292 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 CCDC125Q86Z20 511 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 PLD5Q8N7P1 536 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 DCPSQ96C86 337 aaKnown RBP16.14■□□□□ 0.17
CPSF7-202ENST00000394888 L3MBTL3Q96JM7 780 aaPredicted RBP16.14■□□□□ 0.17
CPSF7-202ENST00000394888 PATJQ8NI35 1801 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 UBOX5O94941 541 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 TNNC2P02585 160 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 ADCYAP1R1P41586 468 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 ZNF143P52747 638 aaPredicted RBP16.14■□□□□ 0.17
CPSF7-202ENST00000394888 DYNLT1P63172 113 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 ZNF484Q5JVG2 852 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 CYB5D1Q6P9G0 228 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 P3H4Q92791 437 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 E5RJQ4 531 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 GPR32O75388 356 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 SSTR1P30872 391 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 SSR1P43307 286 aaKnown RBP16.14■□□□□ 0.17
CPSF7-202ENST00000394888 RPL34P49207 117 aaKnown RBP16.14■□□□□ 0.17
CPSF7-202ENST00000394888 MYO1EQ12965 1108 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 BNIP1Q12981 228 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 CA9Q16790 459 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 ZNF667Q5HYK9 610 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 PMF1Q6P1K2 205 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 CCDC121Q6ZUS5 278 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 LIMS2Q7Z4I7 341 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 SULF1Q8IWU6 871 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 RIBC1Q8N443 379 aaPredicted RBP16.14■□□□□ 0.17
CPSF7-202ENST00000394888 ANKS4BQ8N8V4 417 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 AFG1LQ8WV93 481 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 RTP4Q96DX8 246 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 MRPL45Q9BRJ2 306 aaKnown RBP16.14■□□□□ 0.17
CPSF7-202ENST00000394888 STMN4Q9H169 189 aaPredicted RBP16.14■□□□□ 0.17
CPSF7-202ENST00000394888 ASB7Q9H672 318 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 GTF2IRD1Q9UHL9 959 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 USP18Q9UMW8 372 aa16.14■□□□□ 0.17
CPSF7-202ENST00000394888 COL1A2P08123 1366 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 GOLGA8MH3BSY2 632 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 PIK3R2O00459 728 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 KIAA0754O94854 1291 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 HMGCRP04035 888 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 ELF3P78545 371 aaPredicted RBP16.13■□□□□ 0.17
CPSF7-202ENST00000394888 LACTBP83111 547 aaPredicted RBP16.13■□□□□ 0.17
CPSF7-202ENST00000394888 LMNB2Q03252 620 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 MTFR1Q15390 333 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 ZC3H12AQ5D1E8 599 aaKnown RBP16.13■□□□□ 0.17
CPSF7-202ENST00000394888 ANKMY2Q8IV38 441 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 KLC4Q9NSK0 619 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 USP15Q9Y4E8 981 aaPredicted RBP16.13■□□□□ 0.17
CPSF7-202ENST00000394888 APOC4-APOC2K7ER74 178 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 APOC2P02655 101 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 ATICP31939 592 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 PCK1P35558 622 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 IGBP1P78318 339 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 TFDP1Q14186 410 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 NOMO1Q15155 1222 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 EXOC8Q8IYI6 725 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 ZBED8Q8IZ13 594 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 ANKRD42Q8N9B4 389 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 NLRC5Q86WI3 1866 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 MYLKQ15746 1914 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 GSTA1P08263 222 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 TMED2Q15363 201 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 PPP1R26Q5T8A7 1209 aaPredicted RBP16.13■□□□□ 0.17
CPSF7-202ENST00000394888 CES4AQ5XG92 561 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 ZNF534Q76KX8 674 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 GSTA5Q7RTV2 222 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 FAF2Q96CS3 445 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 HPDLQ96IR7 371 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 C12orf65Q9H3J6 166 aaKnown RBP16.13■□□□□ 0.17
CPSF7-202ENST00000394888 CD248Q9HCU0 757 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 FETUBQ9UGM5 382 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 PCSK1NQ9UHG2 260 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 TEX264Q9Y6I9 313 aa16.13■□□□□ 0.17
CPSF7-202ENST00000394888 SPAG7O75391 227 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 KRT19P08727 400 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 SMPD1P17405 629 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 ADORA2AP29274 412 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 MTM1Q13496 603 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 TTLL4Q14679 1199 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 KCTD2Q14681 263 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 ADGRD1Q6QNK2 874 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 CCHCR1Q8TD31 782 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 SLC35F5Q8WV83 523 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 UTP4Q969X6 686 aaKnown RBP16.12■□□□□ 0.17
CPSF7-202ENST00000394888 CYP3A43Q9HB55 503 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 SLCO1B3Q9NPD5 702 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 MTMR10Q9NXD2 777 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 BARX2Q9UMQ3 279 aaPredicted RBP16.12■□□□□ 0.17
CPSF7-202ENST00000394888 C2CD2Q9Y426 696 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 PTPRDP23468 1912 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 DPYSL4O14531 572 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 POTEJP0CG39 1038 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 PLEKHG4Q58EX7 1191 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 PPP1R13LQ8WUF5 828 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms