RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 GEMP55040 296 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 ANTXR2P58335 489 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 HERVK_113P62684 666 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 MROH9Q5TGP6 573 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 GPAT2Q6NUI2 795 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 DENND1BQ6P3S1 775 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 LPCAT2Q7L5N7 544 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 FASTKD5Q7L8L6 764 aaKnown RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 FAM71DQ8N9W8 422 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 ZNF184Q99676 751 aaPredicted RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 THAP1Q9NVV9 213 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 ANKRD6Q9Y2G4 727 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 MYH10P35580 1976 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 ZBTB22O15209 634 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 PDHBP11177 359 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 CYP19A1P11511 503 aaPredicted RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 RRM2P31350 389 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 TRIM71Q2Q1W2 868 aaKnown RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 SYTL3Q4VX76 610 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 THEMIS2Q5TEJ8 643 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 SETD9Q8NE22 299 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 ZNF669Q96BR6 464 aaPredicted RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 HES6Q96HZ4 224 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 PPP1R36Q96LQ0 422 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 KLHL25Q9H0H3 589 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 THAP2Q9H0W7 228 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 GDF3Q9NR23 364 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 KLHL11Q9NVR0 708 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 HPS5Q9UPZ3 1129 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 FLT1P17948 1338 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 H7C0S8 307 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 CSF1RP07333 972 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 IMPDH2P12268 514 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 EPS8Q12929 822 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 IER5Q5VY09 327 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 SPATA2LQ8IUW3 424 aaPredicted RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 STK32AQ8WU08 396 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 GLMNQ92990 594 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 EXOSC4Q9NPD3 245 aaKnown RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 AGAP1Q9UPQ3 857 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 VWA5AO00534 786 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 STX7O15400 261 aaKnown RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 CYTH3O43739 400 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 FASP25445 335 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 XRCC4Q13426 336 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 OASLQ15646 514 aaKnown RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 TMC3Q7Z5M5 1100 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 MTDHQ86UE4 582 aaKnown RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 PALB2Q86YC2 1186 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 PAFAH2Q99487 392 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 MMP19Q99542 508 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 CNOT3O75175 753 aaKnown RBP9.91□□□□□ -0.82
SNX1-202ENST00000380285 HPCAP84074 193 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 EMC2Q15006 297 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 RMND5BQ96G75 393 aaPredicted RBP9.91□□□□□ -0.82
SNX1-202ENST00000380285 ZFYVE19Q96K21 471 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 APOL4Q9BPW4 351 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.91□□□□□ -0.82
SNX1-202ENST00000380285 SLC39A10Q9ULF5 831 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 ZNF23P17027 643 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 DNAJB2P25686 324 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 KCNJ1P48048 391 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 GJC2Q5T442 439 aaPredicted RBP9.91□□□□□ -0.82
SNX1-202ENST00000380285 ZBTB49Q6ZSB9 765 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 IFNEQ86WN2 208 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 RBM46Q8TBY0 533 aaKnown RBP9.91□□□□□ -0.82
SNX1-202ENST00000380285 C1orf50Q9BV19 199 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 COMMD8Q9NX08 183 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 TBX20Q9UMR3 447 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 MED26O95402 600 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 MYL3P08590 195 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 ASB2Q96Q27 587 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 KATNAL1Q9BW62 490 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 A0A087WXM4 84 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 ASNA1O43681 348 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 ECE2O60344 883 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 RAD17O75943 681 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 KLK7P49862 253 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 GSTA3Q16772 222 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 PLEKHA7Q6IQ23 1121 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 FBXO36Q8NEA4 188 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 TMC2Q8TDI7 906 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 ATP8B4Q8TF62 1192 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 AGAP3Q96P47 875 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 MXRA8Q9BRK3 442 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 SPON2Q9BUD6 331 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 DYRK4Q9NR20 520 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 MYRFQ9Y2G1 1151 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 C15orf38-AP3S2A0A0A6YYH1 394 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 C19orf81C9J6K1 198 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 H3BQF6 201 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 RIPK2O43353 540 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 ENTPD3O75355 529 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 GUCA1CO95843 209 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 F9P00740 461 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 CYBBP04839 570 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 ALADP13716 330 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 AKR1B1P15121 316 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 AQP5P55064 265 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 GPSM2P81274 684 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms