RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 MYBPC2Q14324 1141 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 SV2CQ496J9 727 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 CCDC40Q4G0X9 1142 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 PABPC1LQ4VXU2 614 aaKnown RBP11.04□□□□□ -0.64
COL5A1-202ENST00000371820 FAM26FQ5R3K3 315 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 C9orf57Q5W0N0 161 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 OVOS1Q6IE37 1185 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 RSPO2Q6UXX9 243 aaPredicted RBP11.04□□□□□ -0.64
COL5A1-202ENST00000371820 MTSS1LQ765P7 747 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 FRMD5Q7Z6J6 570 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 VPS36Q86VN1 386 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 METTL23Q86XA0 190 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 GPD1LQ8N335 351 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 SLC44A3Q8N4M1 653 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 DTWD2Q8NBA8 298 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 LEMD2Q8NC56 503 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 C1orf131Q8NDD1 294 aaKnown RBP11.04□□□□□ -0.64
COL5A1-202ENST00000371820 PNKPQ96T60 521 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 FAM213AQ9BRX8 229 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 SELENOOQ9BVL4 669 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 KIAA1586Q9HCI6 787 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 AVENQ9NQS1 362 aaPredicted RBP11.04□□□□□ -0.64
COL5A1-202ENST00000371820 DPP3Q9NY33 737 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 RBAKQ9NYW8 714 aaPredicted RBP11.04□□□□□ -0.64
COL5A1-202ENST00000371820 VPS18Q9P253 973 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 CDH7Q9ULB5 785 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 PTPRZ1P23471 2315 aaPredicted RBP11.03□□□□□ -0.64
COL5A1-202ENST00000371820 VPS13AQ96RL7 3174 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 GVINP1Q7Z2Y8 2422 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 ANHXE9PGG2 379 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 PIRO00625 290 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 ZNF197O14709 1029 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 CALUO43852 315 aaPredicted RBP11.03□□□□□ -0.64
COL5A1-202ENST00000371820 ATP1A1P05023 1023 aaKnown RBP11.03□□□□□ -0.64
COL5A1-202ENST00000371820 PTPN2P17706 415 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 ADSSP30520 456 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 LMAN1P49257 510 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 GUCY2FP51841 1108 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 CASP5P51878 434 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 SLC20A2Q08357 652 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 ADCY1Q08828 1119 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 KCNA1Q09470 495 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 HTR4Q13639 388 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 ANGPT1Q15389 498 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 PPP2R5EQ16537 467 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 CRELD2Q6UXH1 353 aaPredicted RBP11.03□□□□□ -0.64
COL5A1-202ENST00000371820 HS2ST1Q7LGA3 356 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 SPATS2Q86XZ4 545 aaKnown RBP11.03□□□□□ -0.64
COL5A1-202ENST00000371820 THEM5Q8N1Q8 247 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 NKD2Q969F2 451 aaPredicted RBP11.03□□□□□ -0.64
COL5A1-202ENST00000371820 PBKQ96KB5 322 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 SENP8Q96LD8 212 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 RUFY1Q96T51 708 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 SLC39A2Q9NP94 309 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 AIPL1Q9NZN9 384 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 INTUQ9ULD6 942 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 MRPS23Q9Y3D9 190 aaKnown RBP11.03□□□□□ -0.64
COL5A1-202ENST00000371820 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL5A1-202ENST00000371820 INSL5Q9Y5Q6 135 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 DMDP11532 3685 aa11.03□□□□□ -0.64
COL5A1-202ENST00000371820 ANK1P16157 1881 aa11.02□□□□□ -0.64
COL5A1-202ENST00000371820 ZNF233A6NK53 670 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 HSF2BPO75031 334 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 CYP11A1P05108 521 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 TMEM191BP0C7N4 346 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 EIF4A3P38919 411 aaKnown RBP11.02□□□□□ -0.65
COL5A1-202ENST00000371820 TNNT3P45378 269 aaPredicted RBP11.02□□□□□ -0.65
COL5A1-202ENST00000371820 TFAMQ00059 246 aaKnown RBP11.02□□□□□ -0.65
COL5A1-202ENST00000371820 SMARCB1Q12824 385 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 GPR17Q13304 367 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 CYP4A22Q5TCH4 519 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 PDZD4Q76G19 769 aaPredicted RBP11.02□□□□□ -0.65
COL5A1-202ENST00000371820 RRAGAQ7L523 313 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 EFCAB13Q8IY85 973 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 LRRC52Q8N7C0 313 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 KIAA0895Q8NCT3 520 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 GPR152Q8TDT2 470 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 TAF4BQ92750 862 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 FGF13Q92913 245 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 SAAL1Q96ER3 474 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 ANKRD36BP1Q96IX9 119 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 ZNF512Q96ME7 567 aaPredicted RBP11.02□□□□□ -0.65
COL5A1-202ENST00000371820 MMS19Q96T76 1030 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 CBWD1Q9BRT8 395 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 EPC1Q9H2F5 836 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 TBC1D17Q9HA65 648 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 PLCB1Q9NQ66 1216 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 ARHGEF3Q9NR81 526 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 SLC2A4RGQ9NR83 387 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 DNMT3BQ9UBC3 853 aaKnown RBP11.02□□□□□ -0.65
COL5A1-202ENST00000371820 HSFX1Q9UBD0 423 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 ITGA11Q9UKX5 1188 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 CA14Q9ULX7 337 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 TIMM13Q9Y5L4 95 aaPredicted RBP11.02□□□□□ -0.65
COL5A1-202ENST00000371820 NUMBLQ9Y6R0 609 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 SPTBN4Q9H254 2564 aa11.02□□□□□ -0.65
COL5A1-202ENST00000371820 ERICH4A6NGS2 130 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 KPNA7A9QM74 516 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 TULP2O00295 520 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 PDXKO00764 312 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms