RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 TMOD4Q9NZQ9 345 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 ZNF70Q9UC06 446 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 RASAL2Q9UJF2 1139 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 PAXBP1Q9Y5B6 917 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 UMODL1Q5DID0 1318 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 RFX7Q2KHR2 1363 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 IBTKQ9P2D0 1353 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 ASXL3Q9C0F0 2248 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 TRBV23-1A0A0A0MS06 115 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 A0A1W2PQH9 124 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 PRR19A6NJB7 356 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 VGLL3A8MV65 326 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 A8MVJ9 347 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 HNRNPCL2B2RXH8 293 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 H0Y626 953 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 AGRPO00253 132 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 IRAK2O43187 625 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ZBTB43O43298 467 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 HNRNPCL1O60812 293 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 GOSR1O95249 250 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 MT-CO1P00395 513 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 CSTBP04080 98 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 GZMAP12544 262 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 SCG2P13521 617 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 PLA2G2AP14555 144 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ATP2A2P16615 1042 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 TMOD1P28289 359 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 GNL1P36915 607 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 USP8P40818 1118 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 MSH2P43246 934 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 SCNN1BP51168 640 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ZNF200P98182 395 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 PPATQ06203 517 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 DLX2Q07687 328 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 SEMA5AQ13591 1074 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 PCBP2Q15366 365 aaKnown RBP eCLIP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 MTHFSDQ2M296 383 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 VWA3BQ502W6 1294 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 N4BP2L1Q5TBK1 243 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 FOXB2Q5VYV0 432 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 PGBD2Q6P3X8 592 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 PSRC1Q6PGN9 363 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ANGPTL8Q6UXH0 198 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 UNC5AQ6ZN44 842 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 RUFY4Q6ZNE9 571 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ARHGEF18Q6ZSZ5 1173 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ZER1Q7Z7L7 766 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 GALNT7Q86SF2 657 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 LRRC49Q8IUZ0 686 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 KRT78Q8N1N4 520 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 AVL9Q8NBF6 648 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 UTP15Q8TED0 518 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 FAXDC2Q96IV6 333 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 GBP4Q96PP9 640 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 PPP1R16BQ96T49 567 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ALG1Q9BT22 464 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 TMEM120AQ9BXJ8 343 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 EDEM3Q9BZQ6 932 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 NT5C3AQ9H0P0 336 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 GPRC5BQ9NZH0 403 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 EXTL2Q9UBQ6 330 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 AASSQ9UDR5 926 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 POLQO75417 2590 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 TRAV20A0A0B4J274 112 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 LINC00854A0A1B0GVQ3 168 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 CCDC169A6NNP5 214 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 A6NNZ2 444 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 TMCO5BA8MYB1 307 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 AP1G1O43747 822 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 KALRNO60229 2985 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 SUSD5O60279 629 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ADAMTS4O75173 837 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 DGKIO75912 1065 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 CBX7O95931 251 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 TGFB1P01137 390 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 FGBP02675 491 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 CEACAM5P06731 702 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 RHOXF2BP0C7M4 288 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ZNF865P0CJ78 1059 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 MYL6BP14649 208 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 MC4RP32245 332 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 MTHFRP42898 656 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 SLC12A2P55011 1212 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 OXCT1P55809 520 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ERVK-21P61565 698 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 AP2B1P63010 937 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 SUMO1P63165 101 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 SHROOM1Q2M3G4 852 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 BBS9Q3SYG4 887 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 CAVIN4Q5BKX8 364 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 FAM209AQ5JX71 171 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 UBXN11Q5T124 520 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 STRIP1Q5VSL9 837 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 C11orf88Q6PI97 169 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 TMEM110Q86TL2 294 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 TTC6Q86TZ1 520 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 SIAH1Q8IUQ4 282 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 MFSD4AQ8N468 514 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 FAM156AQ8NDB6 213 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 C1orf162Q8NEQ5 155 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms