RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 TBL3Q12788 808 aaKnown RBP18.54■□□□□ 0.56
SMG5-201ENST00000361813 MTMR2Q13614 643 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 OASLQ15646 514 aaKnown RBP18.54■□□□□ 0.56
SMG5-201ENST00000361813 C17orf75Q9HAS0 396 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 BOLA3Q53S33 107 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 TMTC4Q5T4D3 741 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 FRMPD4Q14CM0 1322 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 TGFB1I1O43294 461 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 RALBP11234 206 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 ROR2Q01974 943 aaKnown RBP18.54■□□□□ 0.56
SMG5-201ENST00000361813 INPP5AQ14642 412 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 ECHDC2Q86YB7 292 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 RNF148Q8N7C7 305 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 VPS33BQ9H267 617 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 DDX4Q9NQI0 724 aaKnown RBP18.54■□□□□ 0.56
SMG5-201ENST00000361813 HOXC10Q9NYD6 342 aa18.54■□□□□ 0.56
SMG5-201ENST00000361813 F8VP50 259 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 THRAP10827 490 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 CREB1P16220 341 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 PSMC3P17980 439 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 GARTP22102 1010 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 MARSP56192 900 aaKnown RBP18.53■□□□□ 0.56
SMG5-201ENST00000361813 C1QBPQ07021 282 aaKnown RBP18.53■□□□□ 0.56
SMG5-201ENST00000361813 ZNF786Q8N393 782 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 BBS5Q8N3I7 341 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 TLCD1Q96CP7 247 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 AVENQ9NQS1 362 aaPredicted RBP18.53■□□□□ 0.56
SMG5-201ENST00000361813 SNX13Q9Y5W8 968 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 KDM1AO60341 852 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 BANF1O75531 89 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 GRM1Q13255 1194 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 LRRC71Q8N4P6 559 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 RNF139Q8WU17 664 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 FBXO6Q9NRD1 293 aaPredicted RBP18.53■□□□□ 0.56
SMG5-201ENST00000361813 FGRP09769 529 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 KCNA4P22459 653 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 TTC33Q6PID6 262 aaPredicted RBP18.53■□□□□ 0.56
SMG5-201ENST00000361813 SETD3Q86TU7 594 aaPredicted RBP18.53■□□□□ 0.56
SMG5-201ENST00000361813 PALB2Q86YC2 1186 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 BEST2Q8NFU1 509 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 USP33Q8TEY7 942 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 SPOCK2Q92563 424 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 CISHQ9NSE2 258 aa18.53■□□□□ 0.56
SMG5-201ENST00000361813 PDGFRBP09619 1106 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 HMGCS2P54868 508 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 NLRP11P59045 1033 aaKnown RBP18.52■□□□□ 0.56
SMG5-201ENST00000361813 PDPK2PQ6A1A2 396 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 DSTYKQ6XUX3 929 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 TTC39CQ8N584 583 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 ZMAT2Q96NC0 199 aaKnown RBP18.52■□□□□ 0.56
SMG5-201ENST00000361813 FSCN2O14926 492 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 PROCP04070 461 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 SKIV2L2P42285 1042 aaKnown RBP18.52■□□□□ 0.56
SMG5-201ENST00000361813 HDAC4P56524 1084 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 BNC2Q6ZN30 1099 aaPredicted RBP18.52■□□□□ 0.56
SMG5-201ENST00000361813 DENND5BQ6ZUT9 1274 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 OTOAQ7RTW8 1153 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 DDI1Q8WTU0 396 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 JADE3Q92613 823 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 TFE3P19532 575 aaPredicted RBP18.52■□□□□ 0.56
SMG5-201ENST00000361813 GCNT1Q02742 428 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 KBTBD12Q3ZCT8 623 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 ZNF572Q7Z3I7 529 aaPredicted RBP18.52■□□□□ 0.56
SMG5-201ENST00000361813 KRT27Q7Z3Y8 459 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 DPP9Q86TI2 863 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 USP18Q9UMW8 372 aa18.52■□□□□ 0.56
SMG5-201ENST00000361813 A0A1W2PPM1 405 aa18.52■□□□□ 0.55
SMG5-201ENST00000361813 EDF1O60869 148 aaKnown RBP18.52■□□□□ 0.55
SMG5-201ENST00000361813 MYL6P60660 151 aa18.52■□□□□ 0.55
SMG5-201ENST00000361813 FMO1Q01740 532 aa18.52■□□□□ 0.55
SMG5-201ENST00000361813 CDC26Q8NHZ8 85 aa18.52■□□□□ 0.55
SMG5-201ENST00000361813 PTPRN2Q92932 1015 aa18.52■□□□□ 0.55
SMG5-201ENST00000361813 GMCL1Q96IK5 515 aa18.52■□□□□ 0.55
SMG5-201ENST00000361813 STRNO43815 780 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 RAG1P15918 1043 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 TMED10P49755 219 aaKnown RBP18.51■□□□□ 0.55
SMG5-201ENST00000361813 FOXR2Q6PJQ5 311 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 TRABD2AQ86V40 505 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 USP13Q92995 863 aaPredicted RBP18.51■□□□□ 0.55
SMG5-201ENST00000361813 GCNAQ96QF7 691 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 FRMD8P1Q9BZ68 369 aaPredicted RBP18.51■□□□□ 0.55
SMG5-201ENST00000361813 CYP1A2P05177 515 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 SULT1E1P49888 294 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 ITGA9Q13797 1035 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 TTC27Q6P3X3 843 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 SEPT12Q8IYM1 358 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 FAM71AQ8IYT1 594 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 CNDP1Q96KN2 507 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 NT5C1AQ9BXI3 368 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 FHDC1Q9C0D6 1143 aaPredicted RBP18.51■□□□□ 0.55
SMG5-201ENST00000361813 FAM192AQ9GZU8 254 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 EFCAB1Q9HAE3 211 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 DCDC2Q9UHG0 476 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 CPSF3Q9UKF6 684 aaKnown RBP18.51■□□□□ 0.55
SMG5-201ENST00000361813 C3orf70A6NLC5 250 aaPredicted RBP18.51■□□□□ 0.55
SMG5-201ENST00000361813 ANKRD63C9JTQ0 380 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 TPI1P60174 286 aa18.51■□□□□ 0.55
SMG5-201ENST00000361813 PDAP1Q13442 181 aaKnown RBP18.51■□□□□ 0.55
SMG5-201ENST00000361813 PARP6Q2NL67 630 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms