RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 GYS2P54840 703 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 NAP1L1P55209 391 aaKnown RBP15.5■□□□□ 0.07
CXCL12-201ENST00000343575 VSNL1P62760 191 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 HTRA4P83105 476 aaPredicted RBP15.5■□□□□ 0.07
CXCL12-201ENST00000343575 YWHAHQ04917 246 aaPredicted RBP15.5■□□□□ 0.07
CXCL12-201ENST00000343575 CKAP4Q07065 602 aaKnown RBP15.5■□□□□ 0.07
CXCL12-201ENST00000343575 INTS6LQ5JSJ4 861 aaKnown RBP15.5■□□□□ 0.07
CXCL12-201ENST00000343575 FAM171A1Q5VUB5 890 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 RNF168Q8IYW5 571 aaPredicted RBP15.5■□□□□ 0.07
CXCL12-201ENST00000343575 BTBD6Q96KE9 485 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 SLC4A5Q9BY07 1137 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 CEP83Q9Y592 693 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 A6NNZ2 444 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 TRAPPC3O43617 180 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 GJB5O95377 273 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 AMPD2Q01433 879 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 PLCB3Q01970 1234 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 TUBB8Q3ZCM7 444 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 VARS2Q5ST30 1063 aaKnown RBP15.49■□□□□ 0.07
CXCL12-201ENST00000343575 PPP1R15BQ5SWA1 713 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 KCNT2Q6UVM3 1135 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 NLRC5Q86WI3 1866 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 METTL23Q86XA0 190 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 XYLT1Q86Y38 959 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 CPNE8Q86YQ8 564 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 CMTR2Q8IYT2 770 aaKnown RBP15.49■□□□□ 0.07
CXCL12-201ENST00000343575 TRIM11Q96F44 468 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 IGSF21Q96ID5 467 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 TLR10Q9BXR5 811 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 RHOBTB2Q9BYZ6 727 aa15.49■□□□□ 0.07
CXCL12-201ENST00000343575 ZBBXA8MT70 800 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 TBC1D4O60343 1298 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 FTCDO95954 541 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 CALB1P05937 261 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 OR4Q2P0C623 313 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 ALDH7A1P49419 539 aaKnown RBP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 RGS7P49802 495 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 BCAT1P54687 386 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 RPL7AP62424 266 aaKnown RBP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 BST2Q10589 180 aaKnown RBP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 BTG3Q14201 252 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 DNAJC21Q5F1R6 531 aaKnown RBP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 RTP2Q5QGT7 225 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 PPP1R2P3Q6NXS1 205 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 CLEC20AQ6ZU45 233 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 TMEM110Q86TL2 294 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 ZMIZ2Q8NF64 920 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 ZNF564Q8TBZ8 553 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 HERVK_113Q902F9 699 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 C18orf8Q96DM3 657 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 PIWIL1Q96J94 861 aaKnown RBP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 HTATIP2Q9BUP3 242 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 DUSP16Q9BY84 665 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 UVRAGQ9P2Y5 699 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 HESX1Q9UBX0 185 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 SF3B1O75533 1304 aaKnown RBP eCLIP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 E5RJQ4 531 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 PIK3R2O00459 728 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 NCK2O43639 380 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 RABGGTBP53611 331 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 GSCP56915 257 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 PSRC1Q6PGN9 363 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 RSPO2Q6UXX9 243 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 CEP57Q86XR8 500 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 STK32AQ8WU08 396 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 MYLPFQ96A32 169 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 SMOQ99835 787 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 PACSIN2Q9UNF0 486 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-201ENST00000343575 JRKLQ9Y4A0 524 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 HYOU1Q9Y4L1 999 aa15.48■□□□□ 0.07
CXCL12-201ENST00000343575 PTPRDP23468 1912 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 ARHGEF37A1IGU5 675 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 RHOXF2BP0C7M4 288 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 SETSIPP0DME0 302 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 GTF2A1P52655 376 aaPredicted RBP15.47■□□□□ 0.07
CXCL12-201ENST00000343575 PTPROQ16827 1216 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 MEI1Q5TIA1 1274 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 RASIP1Q5U651 963 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 PAPD7Q5XG87 772 aaKnown RBP15.47■□□□□ 0.07
CXCL12-201ENST00000343575 LRRC31Q6UY01 552 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 NT5DC3Q86UY8 548 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 FAM35AQ86V20 835 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 SLC39A11Q8N1S5 342 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 C3orf20Q8ND61 904 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 MCRS1Q96EZ8 462 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 ALS2CR12Q96Q35 445 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 KCNK16Q96T55 309 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 YME1L1Q96TA2 773 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 RHOXF2Q9BQY4 288 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 ZCWPW1Q9H0M4 648 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 KIAA1671Q9BY89 1806 aa15.47■□□□□ 0.07
CXCL12-201ENST00000343575 A0A087WUV0 522 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-201ENST00000343575 TMEM191CA6NGB0 347 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 PAPSS1O43252 624 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-201ENST00000343575 NPR3P17342 541 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 OGDHQ02218 1023 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 ZNF252P-AS1Q0IIN9 211 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 ZNF268Q14587 947 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-201ENST00000343575 LIN9Q5TKA1 542 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 DAAM2Q86T65 1068 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms