RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 SHROOM1Q2M3G4 852 aaPredicted RBP17.89■□□□□ 0.45
GABRB3-202ENST00000311550 LAYNQ6UX15 382 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 MAP4K3Q8IVH8 894 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 ASAP3Q8TDY4 903 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 MKL1Q969V6 931 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 CNPY3Q9BT09 278 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 MRPL1Q9BYD6 325 aaKnown RBP17.89■□□□□ 0.45
GABRB3-202ENST00000311550 NDFIP2Q9NV92 336 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 TNFRSF8P28908 595 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 LAMC2Q13753 1193 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 LY6KQ17RY6 165 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 ARSHQ5FYA8 562 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 CCDC90BQ9GZT6 254 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 TJP2Q9UDY2 1190 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 SLC24A2Q9UI40 661 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 PPME1Q9Y570 386 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 CASZ1Q86V15 1759 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 CYP3A7-CYP3A51PA0A087WV96 503 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 CYP3A7P24462 503 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 AQP5P55064 265 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 CDH8P55286 799 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 SNAPC2Q13487 334 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 INPP4AQ96PE3 977 aaPredicted RBP17.89■□□□□ 0.45
GABRB3-202ENST00000311550 APOL2Q9BQE5 337 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 OLA1Q9NTK5 396 aaKnown RBP17.89■□□□□ 0.45
GABRB3-202ENST00000311550 DDIT4Q9NX09 232 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 CDY2AQ9Y6F7 541 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 CDY1Q9Y6F8 540 aa17.89■□□□□ 0.45
GABRB3-202ENST00000311550 KNDC1Q76NI1 1749 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 A0A087WZ62 844 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 ANGPT2O15123 496 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 TGM2P21980 687 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 ELK3P41970 407 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 TAF6P49848 677 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 NUP93Q8N1F7 819 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 TMEM237Q96Q45 408 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 FDXACB1Q9BRP7 624 aaPredicted RBP17.88■□□□□ 0.45
GABRB3-202ENST00000311550 CDYLQ9Y232 598 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 PIK3C2AO00443 1686 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 AVPR1AP37288 418 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 COPAP53621 1224 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 SLC26A11Q86WA9 606 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 PURBQ96QR8 312 aaKnown RBP17.88■□□□□ 0.45
GABRB3-202ENST00000311550 TRIM62Q9BVG3 475 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 FRMD8P1Q9BZ68 369 aaPredicted RBP17.88■□□□□ 0.45
GABRB3-202ENST00000311550 FZD1Q9UP38 647 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 TLR2O60603 784 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 HOXA10P31260 410 aaPredicted RBP17.88■□□□□ 0.45
GABRB3-202ENST00000311550 BIRC2Q13490 618 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 ETNPPLQ8TBG4 499 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 EME1Q96AY2 570 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 F8VP50 259 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 FAM200BP0CF97 657 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 CYP2B6P20813 491 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 CDC42EP1Q00587 391 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 ANO4Q32M45 955 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 DAB2IPQ5VWQ8 1189 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 TRAPPC12Q8WVT3 735 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 KIAA1683Q9H0B3 1180 aa17.88■□□□□ 0.45
GABRB3-202ENST00000311550 VPS33BQ9H267 617 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 PMPCBO75439 489 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 PDK2Q15119 407 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 C4orf22Q6V702 233 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 PRUNE1Q86TP1 453 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 GPRC5AQ8NFJ5 357 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 TCP10LQ8TDR4 215 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 GLIS2Q9BZE0 524 aaPredicted RBP17.87■□□□□ 0.45
GABRB3-202ENST00000311550 FAM8A1Q9UBU6 413 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 SLIT3O75094 1523 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 KIF1CO43896 1103 aaKnown RBP17.87■□□□□ 0.45
GABRB3-202ENST00000311550 PPP1R11O60927 126 aaPredicted RBP17.87■□□□□ 0.45
GABRB3-202ENST00000311550 ARHGAP18Q8N392 663 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 CEP41Q9BYV8 373 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 SAE1Q9UBE0 346 aaPredicted RBP17.87■□□□□ 0.45
GABRB3-202ENST00000311550 SHOC2Q9UQ13 582 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 WNT10BO00744 389 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 TNPO2O14787 897 aaKnown RBP17.87■□□□□ 0.45
GABRB3-202ENST00000311550 RPS6KA5O75582 802 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 ACO1P21399 889 aaKnown RBP17.87■□□□□ 0.45
GABRB3-202ENST00000311550 PDAP1Q13442 181 aaKnown RBP17.87■□□□□ 0.45
GABRB3-202ENST00000311550 TEX9Q8N6V9 391 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 PRELID2Q8N945 189 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 FAM84AQ96KN4 292 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 AP4E1Q9UPM8 1137 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 AKAP10O43572 662 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 GHRP10912 638 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 IL10P22301 178 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 PDCD2Q16342 344 aaPredicted RBP17.87■□□□□ 0.45
GABRB3-202ENST00000311550 DGKDQ16760 1214 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 C16orf89Q6UX73 402 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 IL1RL2Q9HB29 575 aa17.87■□□□□ 0.45
GABRB3-202ENST00000311550 PIH1D1Q9NWS0 290 aaKnown RBP17.87■□□□□ 0.45
GABRB3-202ENST00000311550 AP3B1O00203 1094 aa17.86■□□□□ 0.45
GABRB3-202ENST00000311550 TGFB1I1O43294 461 aa17.86■□□□□ 0.45
GABRB3-202ENST00000311550 ETS1P14921 441 aa17.86■□□□□ 0.45
GABRB3-202ENST00000311550 NUMBP49757 651 aa17.86■□□□□ 0.45
GABRB3-202ENST00000311550 NUDT2P50583 147 aa17.86■□□□□ 0.45
GABRB3-202ENST00000311550 IL31Q6EBC2 164 aa17.86■□□□□ 0.45
GABRB3-202ENST00000311550 FAM83AQ86UY5 434 aa17.86■□□□□ 0.45
GABRB3-202ENST00000311550 UBQLN1Q9UMX0 589 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms