RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 FAM20AQ96MK3 541 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 PRMT1Q99873 361 aaKnown RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 RRAGDQ9NQL2 400 aaPredicted RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 RAB6BQ9NRW1 208 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 PCMTD2Q9NV79 361 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 UBA2Q9UBT2 640 aaPredicted RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 PRKAG3Q9UGI9 489 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 NAGPAQ9UK23 515 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 POLR3AO14802 1390 aaPredicted RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 ZNF839A8K0R7 811 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 F5H5T6 163 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 IL18RAPO95256 599 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 FGFR1P11362 822 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 NCAM1P13591 858 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 PTPN3P26045 913 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 IL12RB1P42701 662 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 CRKP46108 304 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 PTPN12Q05209 780 aaKnown RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 GRIK3Q13003 919 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 CYP20A1Q6UW02 462 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 KIAA0408Q6ZU52 694 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 CCDC185Q8N715 623 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 RNF149Q8NC42 400 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 GTF3C2Q8WUA4 911 aaPredicted RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 ENOPH1Q9UHY7 261 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 KLF15Q9UIH9 416 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 TCP11X1B4DZS4 312 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 PDGFRBP09619 1106 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 TXNP10599 105 aaKnown RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 CCR4P51679 360 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 ITGA1P56199 1179 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 BNC1Q01954 994 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 CHRNB3Q05901 458 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 NFIAQ12857 509 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 CCNG2Q16589 344 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 TMC5Q6UXY8 1006 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 C4orf22Q6V702 233 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 UTS2BQ765I0 119 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 LONP2Q86WA8 852 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 PROSER1Q86XN7 944 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 HOMEZQ8IX15 550 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 FAM20CQ8IXL6 584 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 GRAMD1CQ8IYS0 662 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 CCDC126Q96EE4 140 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 QKIQ96PU8 341 aaKnown RBP eCLIP7.8□□□□□ -1.161e-6■■■□□ 17.1
PRDM2-201ENST00000235372 SENP7Q9BQF6 1050 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 TNFSF13BQ9Y275 285 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 USP17L15C9J2P7 530 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 USP17L13C9JLJ4 530 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 USP17L11C9JVI0 530 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 USP17L18D6R9N7 530 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 USP17L22D6RA61 530 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 USP17L17D6RBQ6 530 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 USP17L19D6RCP7 530 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 USP17L20D6RJB6 530 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 KIAA0391O15091 583 aaKnown RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 RTN2O75298 545 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 CCNG1P51959 295 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 USP17L24Q0WX57 530 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 TAF1DQ9H5J8 278 aaPredicted RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 STX11O75558 287 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 ANXA9O76027 345 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 KCNA3P22001 575 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 STAT5AP42229 794 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 STAT5BP51692 787 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 GYS2P54840 703 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 GFPT1Q06210 699 aaPredicted RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 SMCO1Q147U7 214 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 DRAP1Q14919 205 aaPredicted RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 LRRC14Q15048 493 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 SMU1Q2TAY7 513 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 NEK5Q6P3R8 708 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 PRPF39Q86UA1 669 aaKnown RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 SFR1Q86XK3 245 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 ZNF655Q8N720 491 aaPredicted RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 EDC3Q96F86 508 aaKnown RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 GOLPH3Q9H4A6 298 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 AGAP1Q9UPQ3 857 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 EDC4Q6P2E9 1401 aaKnown RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 PDE4DIPQ5VU43 2346 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 A0A0B4J269 797 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 LCA5LO95447 670 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 RASA1P20936 1047 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 AP1S1P61966 158 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 TUBB3Q13509 450 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 CARNMT1Q8N4J0 409 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 PJA1Q8NG27 643 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 OTUD7AQ8TE49 926 aaPredicted RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 BHMTQ93088 406 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 MCCC1Q96RQ3 725 aaPredicted RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 INTS2Q9H0H0 1204 aaKnown RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 CAB39LQ9H9S4 337 aa7.8□□□□□ -1.16
PRDM2-201ENST00000235372 RUVBL2Q9Y230 463 aaKnown RBP7.8□□□□□ -1.16
PRDM2-201ENST00000235372 NUP160Q12769 1436 aa7.79□□□□□ -1.16
PRDM2-201ENST00000235372 SLC25A12O75746 678 aa7.79□□□□□ -1.16
PRDM2-201ENST00000235372 ZNF682O95780 498 aa7.79□□□□□ -1.16
PRDM2-201ENST00000235372 STAU1O95793 577 aaKnown RBP7.79□□□□□ -1.16
PRDM2-201ENST00000235372 MYBL2P10244 700 aa7.79□□□□□ -1.16
PRDM2-201ENST00000235372 MBL2P11226 248 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms