RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ITGB3BPQ13352 177 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 SLC22A9Q8IVM8 553 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 SLC30A5Q8TAD4 765 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 SH3RF3Q8TEJ3 882 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 ZNF333Q96JL9 665 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 PCDH9Q9HC56 1237 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 PIK3R1P27986 724 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 CDK7P50613 346 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 CDK16Q00536 496 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 KYAT3Q6YP21 454 aaKnown RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 OR8H2Q8N162 312 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 MYLK2Q9H1R3 596 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 RAD54BQ9Y620 910 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.51□□□□□ -1.05
APOB-201ENST00000233242 SPDYE5A6NIY4 337 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 TAF4O00268 1085 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 TRIM13O60858 407 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 VPS4BO75351 444 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 SKAP2O75563 359 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 HOXB6P17509 224 aaKnown RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 CDC42EP1Q00587 391 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 SPDYE7PQ495Y7 208 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 ZNF662Q6ZS27 426 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 C17orf75Q9HAS0 396 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 NDFIP2Q9NV92 336 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 COMMD8Q9NX08 183 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 NAALADL1Q9UQQ1 740 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 ABCA8O94911 1581 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 CENPXA8MT69 81 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 EPHB2P29323 1055 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 RBP5P82980 135 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 ENKURQ8TC29 256 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 PHACTR1Q9C0D0 580 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 EFCAB6Q5THR3 1501 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 ZBTB39O15060 712 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 TGM2P21980 687 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 PKN3Q6P5Z2 889 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 CCDC33Q8N5R6 958 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 MMTAG2Q9BU76 263 aaKnown RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 KRCC1Q9NPI7 259 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 CYLDQ9NQC7 956 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 ANXA9O76027 345 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 RAD51Q06609 339 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 FBXO36Q8NEA4 188 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 FOPNLQ96NB1 174 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 GCNAQ96QF7 691 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 LRMDAQ9H2I8 198 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 DDX18Q9NVP1 670 aaKnown RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 ZNF446Q9NWS9 450 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 RRN3Q9NYV6 651 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 CYTH3O43739 400 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 SERPINB5P36952 375 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 GCLCP48506 637 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 GRAPQ13588 217 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 GRAPLQ8TC17 118 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 NMRK1Q9NWW6 199 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 DNAJC16Q9Y2G8 782 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 C15orf38-AP3S2A0A0A6YYH1 394 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 USP17L10C9JJH3 530 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 MAGEB2O15479 319 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 ABCB1P08183 1280 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 ME2P23368 584 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 PON1P27169 355 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 ATXN3P54252 364 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 MAPRE1Q15691 268 aaKnown RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 ARPINQ7Z6K5 226 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 SLC10A4Q96EP9 437 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 C8orf4Q9NR00 106 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 CCDC130P13994 396 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 RAB15P59190 212 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 TOP3AQ13472 1001 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 DENND1BQ6P3S1 775 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 OLFML1Q6UWY5 402 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 DGCR14Q96DF8 476 aaKnown RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 NIF3L1Q9GZT8 377 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 ZBTB1Q9Y2K1 713 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 UBA6A0AVT1 1052 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 H0YC42 278 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 SUPT20HL1Q3ZLR7 823 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 EXOC3L1Q86VI1 746 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 PCDHB8Q9UN66 801 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 H3BNX3 289 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 LDLRP01130 860 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 MYBPC2Q14324 1141 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 STXBP2Q15833 593 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 SBK1Q52WX2 424 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 RNF219Q5W0B1 726 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 DHFR2Q86XF0 187 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 CLVS1Q8IUQ0 354 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 TSPAN14Q8NG11 270 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 ZNF669Q96BR6 464 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 ASIC4Q96FT7 647 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 FHDC1Q9C0D6 1143 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 FAM217BQ9NTX9 383 aaPredicted RBP8.51□□□□□ -1.05
APOB-201ENST00000233242 KLHL11Q9NVR0 708 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 KBTBD4Q9NVX7 518 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 SQORQ9Y6N5 450 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 TK2O00142 265 aa8.5□□□□□ -1.05
APOB-201ENST00000233242 NMT2O60551 498 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms